RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 NRN1LQ496H8 165 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 ARMC4Q5T2S8 1044 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 MBOAT2Q6ZWT7 520 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 IGFN1Q86VF2 1251 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 SKA3Q8IX90 412 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 ZNF525Q8N782 197 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 MAPK1IP1LQ8NDC0 245 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 RBM15BQ8NDT2 890 aaKnown RBP13.5□□□□□ -0.25
MRPL55-226ENST00000473066 OR13C2Q8NGS9 318 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 MCUR1Q96AQ8 359 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 POM121Q96HA1 1249 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 NSMCE2Q96MF7 247 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 RBP7Q96R05 134 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 SH3GL3Q99963 347 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 ALG12Q9BV10 488 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 RAB1BQ9H0U4 201 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 PLK3Q9H4B4 646 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 NMNAT1Q9HAN9 279 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-226ENST00000473066 SMURF2Q9HAU4 748 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 CDH20Q9HBT6 801 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 DCAF13Q9NV06 445 aaKnown RBP13.5□□□□□ -0.25
MRPL55-226ENST00000473066 ZNF224Q9NZL3 707 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 SLC7A8Q9UHI5 535 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 V9GYQ6 96 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 NAV3Q8IVL0 2385 aa13.5□□□□□ -0.25
MRPL55-226ENST00000473066 IGHV4-30-2A0A087WSY4 118 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 IQCMA0A1B0GVH7 501 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 FFAR1O14842 300 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 SLC2A10O95528 541 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 IGHMP01871 453 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 PATE4P0C8F1 98 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 HSD17B1P14061 328 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 RHCEP18577 417 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 NR4A1P22736 598 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 PDLIM4P50479 330 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 HSF2Q03933 536 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 CARTPTQ16568 116 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 HIST3H3Q16695 136 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 C10orf128Q5T292 105 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 DNM1P46Q6ZS02 220 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 PIGWQ7Z7B1 504 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 MEX3DQ86XN8 651 aaKnown RBP13.49□□□□□ -0.25
MRPL55-226ENST00000473066 SVOPLQ8N434 492 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 FAM156AQ8NDB6 213 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 HDAC2Q92769 488 aaKnown RBP13.49□□□□□ -0.25
MRPL55-226ENST00000473066 SORCS2Q96PQ0 1159 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 SEPHS2Q99611 448 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 MRPL13Q9BYD1 178 aaKnown RBP13.49□□□□□ -0.25
MRPL55-226ENST00000473066 LRMDAQ9H2I8 198 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 MYOZ1Q9NP98 299 aaPredicted RBP13.49□□□□□ -0.25
MRPL55-226ENST00000473066 CCNB1IP1Q9NPC3 277 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 ARL8BQ9NVJ2 186 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 AURKCQ9UQB9 309 aa13.49□□□□□ -0.25
MRPL55-226ENST00000473066 SLC22A23A1A5C7 686 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 XKRYO14609 159 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 PRSS23O95084 383 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 F12P00748 615 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-226ENST00000473066 SERPINA5P05154 406 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 PCSK6P29122 969 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 SMIM11AP58511 58 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 MRPS34P82930 218 aaKnown RBP13.48□□□□□ -0.25
MRPL55-226ENST00000473066 LSM11P83369 360 aaKnown RBP eCLIP13.48□□□□□ -0.25
MRPL55-226ENST00000473066 FMODQ06828 376 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 TBC1D28Q2M2D7 210 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 MST1LQ2TV78 715 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 DEFB107AQ8IZN7 70 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 LRRC18Q8N456 261 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 SLC30A7Q8NEW0 376 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 OR1J2Q8NGS2 313 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 NSMAFQ92636 917 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 FAM46AQ96IP4 442 aaKnown RBP13.48□□□□□ -0.25
MRPL55-226ENST00000473066 KCNK17Q96T54 332 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 CDRT15Q96T59 188 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 PIMREGQ9BSJ6 248 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 GORASP2Q9H8Y8 452 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 VPS13CQ709C8 3753 aa13.48□□□□□ -0.25
MRPL55-226ENST00000473066 YLPM1P49750 1951 aaKnown RBP13.47□□□□□ -0.25
MRPL55-226ENST00000473066 A0A1W2PRQ8 180 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 ARPC2O15144 300 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 HOXB4P17483 251 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-226ENST00000473066 APLNRP35414 380 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 GLRXP35754 106 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 ZNF133P52736 654 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-226ENST00000473066 SPIBQ01892 262 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 DGCR6Q14129 220 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 SGCAQ16586 387 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 SPATS1Q496A3 300 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 ZBED5Q49AG3 693 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 THEM4Q5T1C6 240 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 PODNL1Q6PEZ8 512 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 TBPL2Q6SJ96 375 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 TMPRSS11FQ6ZWK6 438 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 ANKS4BQ8N8V4 417 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 SLC7A13Q8TCU3 470 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 MRPL24Q96A35 216 aaKnown RBP13.47□□□□□ -0.25
MRPL55-226ENST00000473066 PYURFQ96I23 114 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 ZNF75AQ96N20 296 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 ZNF570Q96NI8 536 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 TSPAN32Q96QS1 320 aa13.47□□□□□ -0.25
MRPL55-226ENST00000473066 TNFRSF13CQ96RJ3 184 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms