RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 C9orf16Q9BUW7 83 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 TMEM38BQ9NVV0 291 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 USE1Q9NZ43 259 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 SLC25A15Q9Y619 301 aa17.51■□□□□ 0.39
SF1-213ENST00000472725 PKDREJQ9NTG1 2253 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 SAC3D1A6NKF1 404 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 IFNGP01579 166 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 HMGN1P05114 100 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 OR8G3PP0DMU2 310 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 HIST1H1CP16403 213 aaKnown RBP17.5■□□□□ 0.39
SF1-213ENST00000472725 CDKN2AP42771 156 aaKnown RBP17.5■□□□□ 0.39
SF1-213ENST00000472725 CRISP1P54107 249 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 CDK5Q00535 292 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 MYBPC1Q00872 1141 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 SNTB1Q13884 538 aaKnown RBP17.5■□□□□ 0.39
SF1-213ENST00000472725 PGGHGQ32M88 737 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 C3orf36Q3SXR2 165 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 FOXL2NBQ6ZUU3 175 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 WDR31Q8NA23 367 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 NANOS1Q8WY41 292 aaKnown RBP17.5■□□□□ 0.39
SF1-213ENST00000472725 NELFAQ9H3P2 528 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 SLC25A19Q9HC21 320 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 ADGRG4Q8IZF6 3080 aa17.5■□□□□ 0.39
SF1-213ENST00000472725 FAM221AA4D161 298 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 BAG2O95816 211 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 IGFBP5P24593 272 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 SSTR2P30874 369 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 NR1H2P55055 460 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 BEX5Q5H9J7 111 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 LEG1Q6P5S2 330 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 C22orf34Q6ZV56 151 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 PTCHD4Q6ZW05 846 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 SLC22A24Q8N4F4 322 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 OR4Q3Q8NH05 313 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 OR4K13Q8NH42 304 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 MARVELD3Q96A59 401 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 WACQ9BTA9 647 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 PRRG3Q9BZD7 231 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 SYT4Q9H2B2 425 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 DCLRE1BQ9H816 532 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 SIAEQ9HAT2 523 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 C8orf4Q9NR00 106 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 CMC2Q9NRP2 79 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 ORC6Q9Y5N6 252 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 FKBP7Q9Y680 259 aa17.49■□□□□ 0.39
SF1-213ENST00000472725 A6NNC1 897 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 KHDRBS3O75525 346 aaKnown RBP17.48■□□□□ 0.39
SF1-213ENST00000472725 SLC2A10O95528 541 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 IGFBP1P08833 259 aaPredicted RBP17.48■□□□□ 0.39
SF1-213ENST00000472725 POU1F1P28069 291 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 ALDH3A2P51648 485 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 ELF3P78545 371 aaPredicted RBP17.48■□□□□ 0.39
SF1-213ENST00000472725 FMODQ06828 376 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.48■□□□□ 0.39
SF1-213ENST00000472725 DAG1Q14118 895 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 GINS1Q14691 196 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 HIKESHIQ53FT3 197 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 ZNF362Q5T0B9 420 aaPredicted RBP17.48■□□□□ 0.39
SF1-213ENST00000472725 NPEPL1Q8NDH3 523 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 OR52E2Q8NGJ4 325 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 OR52N5Q8NH56 324 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 ZC3HAV1LQ96H79 300 aaKnown RBP17.48■□□□□ 0.39
SF1-213ENST00000472725 NMNAT3Q96T66 252 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 CIB1Q99828 191 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 RACGAP1Q9H0H5 632 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 TMEFF2Q9UIK5 374 aaPredicted RBP17.48■□□□□ 0.39
SF1-213ENST00000472725 FBXL3Q9UKT7 428 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 UGT2A1Q9Y4X1 527 aa17.48■□□□□ 0.39
SF1-213ENST00000472725 A0A096LPE4 126 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 A0A1W2PPZ6 126 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 RIIAD1A6NNX1 92 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 UBL3O95164 117 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 ALPLP05186 524 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 ANPEPP15144 967 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 B4GALT1P15291 398 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 ZNF3P17036 446 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 RAD23AP54725 363 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 RCN1Q15293 331 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 SLC35F1Q5T1Q4 408 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 FAM27BQ5VT28 67 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 SEZ6L2Q6UXD5 910 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 ZBTB46Q86UZ6 589 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 WFDC8Q8IUA0 241 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 EME1Q96AY2 570 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 DDOQ99489 341 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 GABARAPL3Q9BY60 117 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 NUAK2Q9H093 628 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 KCNN2Q9H2S1 579 aa17.47■□□□□ 0.39
SF1-213ENST00000472725 ESRP2Q9H6T0 727 aaKnown RBP17.47■□□□□ 0.39
SF1-213ENST00000472725 CRNNQ9UBG3 495 aaPredicted RBP17.47■□□□□ 0.39
SF1-213ENST00000472725 IGKV1D-43A0A0B4J1Z2 117 aa17.46■□□□□ 0.39
SF1-213ENST00000472725 H7C1C5 153 aa17.46■□□□□ 0.39
SF1-213ENST00000472725 SLC16A7O60669 478 aa17.46■□□□□ 0.39
SF1-213ENST00000472725 CBR1P16152 277 aa17.46■□□□□ 0.39
SF1-213ENST00000472725 CTLA4P16410 223 aa17.46■□□□□ 0.39
SF1-213ENST00000472725 ARR3P36575 388 aa17.46■□□□□ 0.39
SF1-213ENST00000472725 PTDSS1P48651 473 aaKnown RBP17.46■□□□□ 0.39
SF1-213ENST00000472725 CENPAP49450 140 aa17.46■□□□□ 0.39
SF1-213ENST00000472725 SLC25A1P53007 311 aa17.46■□□□□ 0.39
SF1-213ENST00000472725 LCN6P62502 163 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms