RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 TMCC3Q9ULS5 477 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 PSG8Q9UQ74 426 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 ZNF835Q9Y2P0 537 aa3.17□□□□□ -1.9
CLK1-209ENST00000472679 TMEM150BA6NC51 233 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 GNAO1P09471 354 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 MX1P20591 662 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 HRH1P35367 487 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 KRTAP10-10P60014 251 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 BST1Q10588 318 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 ABCA11PQ4W5N1 156 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 C5orf47Q569G3 176 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 TMEM179Q6ZVK1 233 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 EGFL6Q8IUX8 553 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 NT5C3BQ969T7 300 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 NT5C3AQ9H0P0 336 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 RPP21Q9H633 154 aaKnown RBP3.16□□□□□ -1.9
CLK1-209ENST00000472679 CABIN1Q9Y6J0 2220 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 ATAD2BQ9ULI0 1458 aa3.16□□□□□ -1.9
CLK1-209ENST00000472679 A0A1W2PP18 115 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 SPECC1L-ADORA2AF8WAN1 911 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 FGGP02679 453 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 ZNF286BP0CG31 522 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 TAGLN2P37802 199 aaKnown RBP3.15□□□□□ -1.91
CLK1-209ENST00000472679 GPX6P59796 221 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 NUTF2P61970 127 aaKnown RBP3.15□□□□□ -1.91
CLK1-209ENST00000472679 KCNJ2P63252 427 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 LY6EQ16553 131 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 SPECC1LQ69YQ0 1117 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 DNAJC24Q6P3W2 148 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 TMEM135Q86UB9 458 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 PLPPR1Q8TBJ4 325 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 P2RX4Q99571 388 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 GCOM2Q9BZD3 368 aaPredicted RBP3.15□□□□□ -1.91
CLK1-209ENST00000472679 CWH43Q9H720 699 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 KIF26AQ9ULI4 1882 aaPredicted RBP3.15□□□□□ -1.91
CLK1-209ENST00000472679 DOCK9Q9BZ29 2069 aa3.15□□□□□ -1.91
CLK1-209ENST00000472679 TRAV39A0A0B4J263 110 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 A0A0B4J2A0 478 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 F6UB75 175 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 B4GALT5O43286 388 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 SOX15O60248 233 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 FABP3P05413 133 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 HNRNPH3P31942 346 aaKnown RBP3.14□□□□□ -1.91
CLK1-209ENST00000472679 CDKN2BP42772 138 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 ZMYND11Q15326 602 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 ZSCAN26Q16670 478 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 MAJINQ3KP22 176 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 NANOGP8Q6NSW7 305 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 PEX26Q7Z412 305 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 ZNF709Q8N972 641 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 STMN2Q93045 179 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 FAM3DQ96BQ1 224 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 TUBGCP3Q96CW5 907 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 SHPKQ9UHJ6 478 aa3.14□□□□□ -1.91
CLK1-209ENST00000472679 FAM240BA0A1B0GVZ2 78 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 GABARAPO95166 117 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 CRYBB2P43320 205 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 PLP1P60201 277 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 RPL23AP62750 156 aaKnown RBP3.13□□□□□ -1.91
CLK1-209ENST00000472679 RAP1AP62834 184 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 ERCC8Q13216 396 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 PRPSAP1Q14558 356 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 Q5W150 140 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 ZNF836Q6ZNA1 936 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 ABHD13Q7L211 337 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 MS4A15Q8N5U1 240 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 OR1S2Q8NGQ3 325 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 OR4S2Q8NH73 311 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 PDXPQ96GD0 296 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 SPIN2AQ99865 258 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 SPIN2BQ9BPZ2 258 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 C12orf10Q9HB07 376 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 EXTL2Q9UBQ6 330 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 IKZF2Q9UKS7 526 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 ASB3Q9Y575 518 aa3.13□□□□□ -1.91
CLK1-209ENST00000472679 GPATCH8Q9UKJ3 1502 aaKnown RBP3.13□□□□□ -1.91
CLK1-209ENST00000472679 CNTNAP1P78357 1384 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 KANK1Q14678 1352 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 IGHV3-74A0A0B4J1X5 117 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 COLCA2A8K830 154 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 ZNF705GA8MUZ8 300 aaPredicted RBP3.12□□□□□ -1.91
CLK1-209ENST00000472679 AIFM1O95831 613 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 SERPINA3P01011 423 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 SERPIND1P05546 499 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 CISD3P0C7P0 127 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 CASP14P31944 242 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 IFNA8P32881 189 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 MAS1LP35410 378 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 SYCNQ0VAF6 134 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 BST2Q10589 180 aaKnown RBP3.12□□□□□ -1.91
CLK1-209ENST00000472679 TEX43Q6ZNM6 134 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 BIVMQ86UB2 503 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 RIMKLAQ8IXN7 391 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 OR10R2Q8NGX6 335 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 SYNPRQ8TBG9 265 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 PIK3IP1Q96FE7 263 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 SIRT7Q9NRC8 400 aa3.12□□□□□ -1.91
CLK1-209ENST00000472679 NUP214P35658 2090 aaPredicted RBP3.12□□□□□ -1.91
CLK1-209ENST00000472679 BCHEP06276 602 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms