RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 PRSS37A4D1T9 235 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 SHISA9B4DS77 424 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 IDH3BO43837 385 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 UBL3O95164 117 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 ATE1O95260 518 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 NPR2P20594 1047 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 GSTM3P21266 225 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 CAPZA2P47755 286 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 TUBA1BP68363 451 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 TUBA4AP68366 448 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 MRPS34P82930 218 aaKnown RBP13.32□□□□□ -0.28
SDC3-203ENST00000471567 KRR1Q13601 381 aaKnown RBP13.32□□□□□ -0.28
SDC3-203ENST00000471567 KEAP1Q14145 624 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 GSG1Q2KHT4 349 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 ZNF672Q499Z4 452 aaPredicted RBP13.32□□□□□ -0.28
SDC3-203ENST00000471567 MESTQ5EB52 335 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 CD300LDQ6UXZ3 194 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 RASSF6Q6ZTQ3 369 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 TUBA1AQ71U36 451 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 ADCK1Q86TW2 530 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 SKA3Q8IX90 412 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 PIAS4Q8N2W9 510 aaPredicted RBP13.32□□□□□ -0.28
SDC3-203ENST00000471567 CLDN22Q8N7P3 220 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 AQP11Q8NBQ7 271 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 KBTBD8Q8NFY9 601 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 OR10G2Q8NGC3 310 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 GIPC3Q8TF64 312 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 MBD6Q96DN6 1003 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 DUS3LQ96G46 650 aaKnown RBP13.32□□□□□ -0.28
SDC3-203ENST00000471567 SIAEQ9HAT2 523 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 IL20Q9NYY1 176 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 IL20RAQ9UHF4 553 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 FBXL3Q9UKT7 428 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 PLEKHA6Q9Y2H5 1048 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 CDH10Q9Y6N8 788 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 LRBAP50851 2863 aa13.32□□□□□ -0.28
SDC3-203ENST00000471567 IGKV1D-43A0A0B4J1Z2 117 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 SLC22A23A1A5C7 686 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 ZNF503-AS2A6NEH8 195 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 TMCC2O75069 709 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 SLC2A10O95528 541 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 HLA-HP01893 362 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 CD79AP11912 226 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 CD53P19397 219 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 IST1P53990 364 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 FMODQ06828 376 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 COX10Q12887 443 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 SLC22A25Q6T423 547 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 MDP1Q86V88 176 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 IL17RDQ8NFM7 739 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 PIGTQ969N2 578 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 FBXW5Q969U6 566 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 UTP4Q969X6 686 aaKnown RBP13.31□□□□□ -0.28
SDC3-203ENST00000471567 RASD2Q96D21 266 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 SAMD8Q96LT4 415 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 ERMAPQ96PL5 475 aaPredicted RBP13.31□□□□□ -0.28
SDC3-203ENST00000471567 SNX18Q96RF0 628 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 IFT27Q9BW83 186 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 ARMC1Q9NVT9 282 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 ZNF224Q9NZL3 707 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 VSX1Q9NZR4 365 aaPredicted RBP13.31□□□□□ -0.28
SDC3-203ENST00000471567 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.31□□□□□ -0.28
SDC3-203ENST00000471567 UGT2A1Q9Y4X1 527 aa13.31□□□□□ -0.28
SDC3-203ENST00000471567 CREBBPQ92793 2442 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 SOCS2O14508 198 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 DEAF1O75398 565 aaPredicted RBP13.3□□□□□ -0.28
SDC3-203ENST00000471567 E2F6O75461 281 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 PPP1R3DO95685 299 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 CRYAAP02489 173 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 CECR9P0C854 216 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 GUCA1AP43080 201 aaPredicted RBP13.3□□□□□ -0.28
SDC3-203ENST00000471567 ERFP50548 548 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 ARHGDIAP52565 204 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 CDH11P55287 796 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 RAB1AP62820 205 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 NAAAQ02083 359 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 CCNIQ14094 377 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 SLC36A2Q495M3 483 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 FOXL2NBQ6ZUU3 175 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 SLC16A14Q7RTX9 510 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 OR52L1Q8NGH7 329 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 NSMAFQ92636 917 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 NRBF2Q96F24 287 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 ZNF75AQ96N20 296 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 FEVQ99581 238 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 KCNS3Q9BQ31 491 aa13.3□□□□□ -0.28
SDC3-203ENST00000471567 CISD1Q9NZ45 108 aaKnown RBP13.3□□□□□ -0.28
SDC3-203ENST00000471567 RAI1Q7Z5J4 1906 aaPredicted RBP13.3□□□□□ -0.28
SDC3-203ENST00000471567 H7C1C5 153 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 TIPRLO75663 272 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 RAB36O95755 333 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 IDH3GP51553 393 aaPredicted RBP13.29□□□□□ -0.28
SDC3-203ENST00000471567 LCN6P62502 163 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 PIGFQ07326 219 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 SPOCK1Q08629 439 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 FAM27BQ5VT28 67 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 TMEM53Q6P2H8 277 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 TMEM179BQ7Z7N9 219 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 NEUROG1Q92886 237 aa13.29□□□□□ -0.28
SDC3-203ENST00000471567 GTPBP3Q969Y2 492 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms