RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ZNF816-ZNF321PA0A0X1KG74 233 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 ZNF726A6NNF4 738 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 HOXB6P17509 224 aaKnown RBP4.91□□□□□ -1.62
SMC5-202ENST00000471372 OR1E1P30953 314 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 PRKAR2BP31323 418 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 FMO3P31513 532 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 LONP1P36776 959 aaKnown RBP4.91□□□□□ -1.62
SMC5-202ENST00000471372 SLC25A11Q02978 314 aaKnown RBP4.91□□□□□ -1.62
SMC5-202ENST00000471372 GPR107Q5VW38 600 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 SCARA5Q6ZMJ2 495 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 APRG1Q8IVJ8 170 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 ZADH2Q8N4Q0 377 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.91□□□□□ -1.62
SMC5-202ENST00000471372 ASCC1Q8N9N2 400 aaKnown RBP4.91□□□□□ -1.62
SMC5-202ENST00000471372 SPERTQ8NA61 448 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 INO80EQ8NBZ0 244 aaPredicted RBP4.91□□□□□ -1.62
SMC5-202ENST00000471372 ZNF740Q8NDX6 193 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 TMEM104Q8NE00 496 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 OR2AP1Q8NGE2 309 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 OR51L1Q8NGJ5 315 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 FANK1Q8TC84 345 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 LKAAEAR1Q8TD35 194 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 PIH1D2Q8WWB5 315 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 SRMSQ9H3Y6 488 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 RANBP3Q9H6Z4 567 aaPredicted RBP4.91□□□□□ -1.62
SMC5-202ENST00000471372 ZDHHC11Q9H8X9 412 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 MARCH5Q9NX47 278 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 ASF1AQ9Y294 204 aa4.91□□□□□ -1.62
SMC5-202ENST00000471372 A0A1W2PRD5 423 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 C12orf71A8MTZ7 269 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 SLC9A3R1O14745 358 aaPredicted RBP4.9□□□□□ -1.63
SMC5-202ENST00000471372 SCAMP2O15127 329 aaKnown RBP4.9□□□□□ -1.63
SMC5-202ENST00000471372 RNF113AO15541 343 aaKnown RBP4.9□□□□□ -1.63
SMC5-202ENST00000471372 KDELR3O43731 214 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 UBTFL6P0CB48 400 aaPredicted RBP4.9□□□□□ -1.63
SMC5-202ENST00000471372 NR2C1P13056 603 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 CFHR2P36980 270 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 P2RY4P51582 365 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 UGT2B15P54855 530 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 PSMD4P55036 377 aaKnown RBP4.9□□□□□ -1.63
SMC5-202ENST00000471372 LCN2P80188 198 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 ZNF45Q02386 682 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 GGTLC2Q14390 218 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 KCTD19Q17RG1 926 aaPredicted RBP4.9□□□□□ -1.63
SMC5-202ENST00000471372 ZNF525Q8N782 197 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 FAM86B1Q8N7N1 296 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 VN1R2Q8NFZ6 395 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 ZNF596Q8TC21 504 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 CSPG4P5Q96PW8 444 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 SMIM14Q96QK8 99 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 SIAEQ9HAT2 523 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 UGT1A7Q9HAW7 530 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 UGT1A8Q9HAW9 530 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 XCL2Q9UBD3 114 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 RCL1Q9Y2P8 373 aaKnown RBP4.9□□□□□ -1.63
SMC5-202ENST00000471372 KPTNQ9Y664 436 aa4.9□□□□□ -1.63
SMC5-202ENST00000471372 LOC100506127A0A0U1RQW1 187 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 KRT16P08779 473 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 TAS2R19P59542 299 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 NCF4Q15080 339 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 GABRA6Q16445 453 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 Q3ZCU0 254 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 HSP90AA4PQ58FG1 418 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 LIN9Q5TKA1 542 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 ASCL4Q6XD76 172 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 TMEM135Q86UB9 458 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 FBXO36Q8NEA4 188 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 SDR42E1Q8WUS8 393 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 APH1AQ96BI3 265 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 FCRL1Q96LA6 429 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 C9orf72Q96LT7 481 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 OR51J1Q9H342 316 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 GAL3ST2Q9H3Q3 398 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 SH2D2AQ9NP31 389 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 ZC4H2Q9NQZ6 224 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 ZNF275Q9NSD4 429 aaPredicted RBP4.89□□□□□ -1.63
SMC5-202ENST00000471372 DDX19BQ9UMR2 479 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 PIK3R4Q99570 1358 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 LRRK1Q38SD2 2015 aa4.89□□□□□ -1.63
SMC5-202ENST00000471372 THSD7BQ9C0I4 1608 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 HSPB1P04792 205 aaKnown RBP4.88□□□□□ -1.63
SMC5-202ENST00000471372 PMCHP20382 165 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 COX7A1P24310 79 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 TNFSF9P41273 254 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 CCNG1P51959 295 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 APOC4P55056 127 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 STXBP1P61764 594 aaKnown RBP4.88□□□□□ -1.63
SMC5-202ENST00000471372 SP4Q02446 784 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 CDH17Q12864 832 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 SLAQ13239 276 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 RPEL1Q2QD12 228 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 PGGHGQ32M88 737 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 C15orf32Q32M92 178 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 TRMT5Q32P41 509 aaKnown RBP4.88□□□□□ -1.63
SMC5-202ENST00000471372 ULK3Q6PHR2 472 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 TRAM1L1Q8N609 369 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 OR10R2Q8NGX6 335 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 C7orf33Q8WU49 177 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 NICN1Q9BSH3 213 aa4.88□□□□□ -1.63
SMC5-202ENST00000471372 DEFB127Q9H1M4 99 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms