RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 SLC19A2O60779 497 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ATP6AP2O75787 350 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SC5DO75845 299 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 S1PR2O95136 353 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 LRATO95237 230 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 IGHG3P01860 377 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 PMP2P02689 132 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 PET100P0DJ07 73 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 OR13C7P0DN81 318 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ZNF28P17035 718 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 AMD1P17707 334 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 EGR1P18146 543 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 CRHBPP24387 322 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 HRH2P25021 359 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ITGB7P26010 798 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 S100GP29377 79 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SSTR1P30872 391 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SSTR4P31391 388 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SLC6A6P31641 620 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 APLNRP35414 380 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 CFHR2P36980 270 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 AVPR1AP37288 418 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ARL4AP40617 200 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SLC6A8P48029 635 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 NPBWR2P48146 333 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SOX2P48431 317 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 HTR6P50406 440 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 KCNQ1P51787 676 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 CLDN20P56880 219 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 TAS2R41P59536 307 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 EIF5AP63241 154 aaKnown RBP4.64□□□□□ -1.67
COL3A1-205ENST00000470167 IRF9Q00978 393 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 CAV1Q03135 178 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 TCP10Q12799 353 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ZP4Q12836 540 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 TRAF3Q13114 568 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 FOXE3Q13461 319 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 TNXAQ16473 311 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 MAPK14Q16539 360 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 NRN1LQ496H8 165 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ZNF585BQ52M93 769 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 C6orf136Q5SQH8 315 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 MFSD14BQ5SR56 506 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SDHAF4Q5VUM1 108 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 METRNLQ641Q3 311 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 WDR25Q64LD2 544 aaPredicted RBP4.64□□□□□ -1.67
COL3A1-205ENST00000470167 CPZQ66K79 652 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 CAPN13Q6MZZ7 669 aaPredicted RBP4.64□□□□□ -1.67
COL3A1-205ENST00000470167 RHBDD2Q6NTF9 364 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ADAM5Q6NVV9 412 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ZNF613Q6PF04 617 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 FAM198BQ6UWH4 519 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 GSG1LQ6UXU4 331 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 PARS2Q7L3T8 475 aaKnown RBP4.64□□□□□ -1.67
COL3A1-205ENST00000470167 DTX1Q86Y01 620 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SLC30A8Q8IWU4 369 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SIRT2Q8IXJ6 389 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 GABRG1Q8N1C3 465 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SYS1Q8N2H4 156 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 GALNT16Q8N428 558 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 BCORP1Q8N888 145 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 LINC00301Q8NCQ3 95 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ST6GALNAC3Q8NDV1 305 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 OR4S1Q8NGB4 309 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ARRDC2Q8TBH0 407 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 M1APQ8TC57 530 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 TFB1MQ8WVM0 346 aaKnown RBP4.64□□□□□ -1.67
COL3A1-205ENST00000470167 HMGB4Q8WW32 186 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ISOC2Q96AB3 205 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ESAMQ96AP7 390 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 TMEM159Q96B96 161 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 TADA1Q96BN2 335 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 CCDC126Q96EE4 140 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 MRAP2Q96G30 205 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 REEP6Q96HR9 211 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 WDFY2Q96P53 400 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 TP53RKQ96S44 253 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 PAFAH2Q99487 392 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 S100A13Q99584 98 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 C20orf144Q9BQM9 153 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 TIMM29Q9BSF4 260 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 MARVELD1Q9BSK0 173 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 FAAP24Q9BTP7 215 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 RBM24Q9BX46 236 aaKnown RBP4.64□□□□□ -1.67
COL3A1-205ENST00000470167 MAP1LC3CQ9BXW4 147 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ULBP2Q9BZM5 246 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 PIGMQ9H3S5 423 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 WDCPQ9H6R7 721 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 ACTR8Q9H981 624 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SYNPO2LQ9H987 977 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 LMAN1LQ9HAT1 526 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 PLEKHA1Q9HB21 404 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 C3orf14Q9HBI5 128 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 HHATLQ9HCP6 504 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 Q9N2J8 555 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 RAB18Q9NP72 206 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SLC2A4RGQ9NR83 387 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 FBXO6Q9NRD1 293 aaPredicted RBP4.64□□□□□ -1.67
COL3A1-205ENST00000470167 SPANXA1Q9NS26 97 aa4.64□□□□□ -1.67
COL3A1-205ENST00000470167 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms