RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 P2RY6Q15077 328 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 GABRA6Q16445 453 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 C10orf128Q5T292 105 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 SLX4IPQ5VYV7 408 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 BHLHA15Q7RTS1 189 aaPredicted RBP12.98□□□□□ -0.33
COL9A3-209ENST00000469852 JAZF1Q86VZ6 243 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 ZNRF4Q8WWF5 429 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 FOXN4Q96NZ1 517 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 HCAR1Q9BXC0 346 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 NUAK2Q9H093 628 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 MED20Q9H944 212 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 B3GAT2Q9NPZ5 323 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 CMC2Q9NRP2 79 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 PLEKHB1Q9UF11 243 aaPredicted RBP12.98□□□□□ -0.33
COL9A3-209ENST00000469852 BAIAP2Q9UQB8 552 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 GPR52Q9Y2T5 361 aa12.98□□□□□ -0.33
COL9A3-209ENST00000469852 A0A096LPE4 126 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 A0A1W2PPZ6 126 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 A0A1W2PR80 420 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 FAM183AA6NL82 134 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 PRSS44E7EML9 344 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 C16orf97H3BN30 126 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 SURF4O15260 269 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 GPANK1O95872 356 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 SCG5P05408 212 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 IGFBP2P18065 325 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 CDAP32320 146 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 HIKESHIQ53FT3 197 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 THEM4Q5T1C6 240 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 OTPQ5XKR4 325 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 FBXW10Q5XX13 1052 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 C12orf73Q69YU5 71 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 ABHD12BQ7Z5M8 362 aaPredicted RBP12.97□□□□□ -0.33
COL9A3-209ENST00000469852 OR6V1Q8N148 313 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 OR9Q1Q8NGQ5 310 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 OR1K1Q8NGR3 316 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 LINC01560Q8TB33 94 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 KISS1RQ969F8 398 aaPredicted RBP12.97□□□□□ -0.33
COL9A3-209ENST00000469852 S100PBPQ96BU1 408 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 GRIP2Q9C0E4 1043 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 ACTR6Q9GZN1 396 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 RPRD1BQ9NQG5 326 aaKnown RBP12.97□□□□□ -0.33
COL9A3-209ENST00000469852 TVP23BQ9NYZ1 205 aa12.97□□□□□ -0.33
COL9A3-209ENST00000469852 KLF2Q9Y5W3 355 aaPredicted RBP12.97□□□□□ -0.33
COL9A3-209ENST00000469852 IGLV1-36A0A0B4J1U3 117 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 CIB4A0PJX0 185 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 ZNF503-AS2A6NEH8 195 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 ZNF99A8MXY4 864 aaPredicted RBP12.96□□□□□ -0.33
COL9A3-209ENST00000469852 PRKYO43930 277 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 SLC16A7O60669 478 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 THBDP07204 575 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 CLUP10909 449 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 B4GALT1P15291 398 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 IL32P24001 234 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 RAD23AP54725 363 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 KLHL24Q6TFL4 600 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 PACRGLQ8N7B6 248 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 ACBD4Q8NC06 268 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 BCL2L2Q92843 193 aaPredicted RBP12.96□□□□□ -0.33
COL9A3-209ENST00000469852 NABP1Q96AH0 204 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 MUS81Q96NY9 551 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 RBP7Q96R05 134 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 SNX18Q96RF0 628 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 FOXB1Q99853 325 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 NMNAT2Q9BZQ4 307 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 RERGLQ9H628 205 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 SRA1Q9HD15 236 aaKnown RBP12.96□□□□□ -0.33
COL9A3-209ENST00000469852 KLHL21Q9UJP4 597 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 COA3Q9Y2R0 106 aaPredicted RBP12.96□□□□□ -0.33
COL9A3-209ENST00000469852 ORC6Q9Y5N6 252 aa12.96□□□□□ -0.33
COL9A3-209ENST00000469852 NOTCH2Q04721 2471 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 RIIAD1A6NNX1 92 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 FAM171A2A8MVW0 826 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 AHCYL1O43865 530 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 RENP00797 406 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 GYPBP06028 91 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 COL8A1P27658 744 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 PYCR1P32322 319 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 PCYT1AP49585 367 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 TUBA1BP68363 451 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 TUBA4AP68366 448 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 EFNB1P98172 346 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 SORDQ00796 357 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 STK11Q15831 433 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 TBRG1Q3YBR2 411 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 LYPD4Q6UWN0 246 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 FOXL2NBQ6ZUU3 175 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 TUBA1AQ71U36 451 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 ZNF627Q7L945 461 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 BCDIN3DQ7Z5W3 292 aaKnown RBP12.95□□□□□ -0.34
COL9A3-209ENST00000469852 WDR31Q8NA23 367 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 BBS1Q8NFJ9 593 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 FGFBP3Q8TAT2 258 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 PTP4A1Q93096 173 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 UBE2FQ969M7 185 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 WFIKKN1Q96NZ8 548 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 HINT3Q9NQE9 182 aaKnown RBP12.95□□□□□ -0.34
COL9A3-209ENST00000469852 TMEM38BQ9NVV0 291 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 FAM118AQ9NWS6 357 aa12.95□□□□□ -0.34
COL9A3-209ENST00000469852 SMPD3Q9NY59 655 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms