RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 IFNA2P01563 188 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 TK1P04183 234 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 CD1EP15812 388 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 ZNF585AQ6P3V2 769 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 RBM45Q8IUH3 476 aaKnown RBP13.78□□□□□ -0.2
LIMS2-213ENST00000469300 ZNF695Q8IW36 515 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 ACBD4Q8NC06 268 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 ABHD4Q8TB40 342 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 EIF5A2Q9GZV4 153 aaKnown RBP13.78□□□□□ -0.2
LIMS2-213ENST00000469300 MMP28Q9H239 520 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 NTN4Q9HB63 628 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 SBF2Q86WG5 1849 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 TMEM129A0AVI4 362 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 HSPB2A8KAH6 182 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 AGAP14A8MT82 685 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 FXYD1O00168 92 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 SERPINA2P20848 420 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 HTR2CP28335 458 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 HSPB2Q16082 182 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 TCTN1Q2MV58 587 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 TCTN3Q6NUS6 607 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 OXGR1Q96P68 337 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 CMSS1Q9BQ75 279 aaKnown RBP13.78□□□□□ -0.2
LIMS2-213ENST00000469300 PBDC1Q9BVG4 233 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 PRR14Q9BWN1 585 aa13.78□□□□□ -0.2
LIMS2-213ENST00000469300 TRAV17A0A0B4J275 112 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 ALX3O95076 343 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 CRYABP02511 175 aaKnown RBP13.77□□□□□ -0.2
LIMS2-213ENST00000469300 TUBG1P23258 451 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 SEC61A1P61619 476 aaKnown RBP13.77□□□□□ -0.2
LIMS2-213ENST00000469300 SPEM2Q0P670 501 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 ZMAT1Q5H9K5 638 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 CLVS2Q5SYC1 327 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 SLC46A3Q7Z3Q1 461 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 SERPINA12Q8IW75 414 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 ZNF610Q8N9Z0 462 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 BEST4Q8NFU0 473 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 OR52I1Q8NGK6 324 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 OIT3Q8WWZ8 545 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 RASD2Q96D21 266 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 EID2BQ96D98 161 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 OR2A5Q96R48 311 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 OR52A1Q9UKL2 312 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 CACNA1CQ13936 2221 aa13.77□□□□□ -0.2
LIMS2-213ENST00000469300 DVL2O14641 736 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 SBK2P0C263 348 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 SELEP16581 610 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 CCDC71Q8IV32 467 aaPredicted RBP13.77□□□□□ -0.21
LIMS2-213ENST00000469300 RNF128Q8TEB7 428 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 CNTNAP3BQ96NU0 1288 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 TEAD3Q99594 435 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 DUSP15Q9H1R2 295 aaPredicted RBP13.77□□□□□ -0.21
LIMS2-213ENST00000469300 NPAP1Q9NZP6 1156 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 ETV7Q9Y603 341 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 PLXNB2O15031 1838 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 CROCCQ5TZA2 2017 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 PIP5K1CO60331 668 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 FXYD4P59646 89 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 UBE2NLQ5JXB2 153 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 ZNF547Q8IVP9 402 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 OR4K15Q8NH41 348 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 PFN4Q8NHR9 129 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 HINT2Q9BX68 163 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 GLTPQ9NZD2 209 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 GHRLQ9UBU3 117 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 BRWD1Q9NSI6 2320 aa13.77□□□□□ -0.21
LIMS2-213ENST00000469300 TRDV1A0A1B0GX56 115 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 OR7C1O76099 320 aaPredicted RBP13.76□□□□□ -0.21
LIMS2-213ENST00000469300 NKX2-2O95096 273 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 CPT2P23786 658 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 CXADRP78310 365 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 MC2RQ01718 297 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 TFF2Q03403 129 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 GK2Q14410 553 aaPredicted RBP13.76□□□□□ -0.21
LIMS2-213ENST00000469300 MYEF2Q9P2K5 600 aaKnown RBP13.76□□□□□ -0.21
LIMS2-213ENST00000469300 A0A0G2JMP0 313 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 H7C1Q1 480 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 SNAPINO95295 136 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 ACHEP22303 614 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 DEFB109BQ30KR1 87 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 SYT14P1Q58G82 188 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 ESPNLQ6ZVH7 1005 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 SSX9Q7RTT3 188 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 C12orf45Q8N5I9 185 aaPredicted RBP13.76□□□□□ -0.21
LIMS2-213ENST00000469300 OR4M2Q8NGB6 313 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 OR6M1Q8NGM8 313 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 CEP290O15078 2479 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 DOK2O60496 412 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 KNG1P01042 644 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 RAB31Q13636 194 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 COX15Q7KZN9 410 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 OVCH1Q7RTY7 1134 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 DCXRQ7Z4W1 244 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 PTOV1Q86YD1 416 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 GABARAPL3Q9BY60 117 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 UCK1Q9HA47 277 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 COA3Q9Y2R0 106 aaPredicted RBP13.76□□□□□ -0.21
LIMS2-213ENST00000469300 TIMM10BQ9Y5J6 103 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 ACOD1A6NK06 481 aa13.76□□□□□ -0.21
LIMS2-213ENST00000469300 ZNF891A8MT65 544 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms