RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ZNF416Q9BWM5 594 aa10.44□□□□□ -0.74
HDAC3-204ENST00000469207 ZNF385DQ9H6B1 395 aa10.44□□□□□ -0.74
HDAC3-204ENST00000469207 ESM1Q9NQ30 184 aa10.44□□□□□ -0.74
HDAC3-204ENST00000469207 MEPEQ9NQ76 525 aaPredicted RBP10.44□□□□□ -0.74
HDAC3-204ENST00000469207 NANSQ9NR45 359 aa10.44□□□□□ -0.74
HDAC3-204ENST00000469207 ZNF346Q9UL40 294 aaKnown RBP10.44□□□□□ -0.74
HDAC3-204ENST00000469207 WIPI2Q9Y4P8 454 aa10.44□□□□□ -0.74
HDAC3-204ENST00000469207 IGKV1D-43A0A0B4J1Z2 117 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 IGHV1-69-2A0A0G2JMI3 117 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 TPD52L2O43399 206 aaKnown RBP10.43□□□□□ -0.74
HDAC3-204ENST00000469207 KCNAB3O43448 404 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 SPRY3O43610 288 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 BCL10O95999 233 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 MMP7P09237 267 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-204ENST00000469207 ASAH2BP0C7U1 165 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 MAKP20794 623 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 PPIBP23284 216 aaKnown RBP10.43□□□□□ -0.74
HDAC3-204ENST00000469207 MPV17P39210 176 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 COMPP49747 757 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-204ENST00000469207 THEM4Q5T1C6 240 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 REP15Q6BDI9 236 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 TMEM53Q6P2H8 277 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 RETREG3Q86VR2 466 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 ZDHHC22Q8N966 263 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 OR1J1Q8NGS3 322 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 ZNF519Q8TB69 540 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 ZFAND2BQ8WV99 257 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 CCL17Q92583 94 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 C1QTNF5Q9BXJ0 243 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 DECR2Q9NUI1 292 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 ANGPT4Q9Y264 503 aa10.43□□□□□ -0.74
HDAC3-204ENST00000469207 TRIM77I1YAP6 450 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 FMO6PO60774 539 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 SHOX2O60902 331 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-204ENST00000469207 ERLIN1O75477 346 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 TRMUO75648 421 aaKnown RBP10.42□□□□□ -0.74
HDAC3-204ENST00000469207 FARS2O95363 451 aaKnown RBP10.42□□□□□ -0.74
HDAC3-204ENST00000469207 SLC2A10O95528 541 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 IGHV2-5P01817 119 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 HIST1H2ABP04908 130 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 TNFRSF1BP20333 461 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 CD247P20963 164 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 AQP2P41181 271 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 WNT5AP41221 380 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 RAD52P43351 418 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 ARFIP2P53365 341 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 CRYBA2P53672 197 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 CLRN1P58418 232 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 SELENOVP59797 346 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 LAPTM4AQ15012 233 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 HIST3H3Q16695 136 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 CYP51A1Q16850 503 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 TBC1D28Q2M2D7 210 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 SLC36A2Q495M3 483 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 PABPC1L2AQ5JQF8 200 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 SWT1Q5T5J6 900 aaKnown RBP10.42□□□□□ -0.74
HDAC3-204ENST00000469207 HIST3H2AQ7L7L0 130 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 NKAIN4Q8IVV8 208 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 ZNF101Q8IZC7 436 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 C11orf65Q8NCR3 313 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 RBM15BQ8NDT2 890 aaKnown RBP10.42□□□□□ -0.74
HDAC3-204ENST00000469207 BHLHE22Q8NFJ8 381 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-204ENST00000469207 AKR7LQ8NHP1 331 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 MOSPD2Q8NHP6 518 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 PFN4Q8NHR9 129 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 SNX33Q8WV41 574 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 HIST1H2ACQ93077 130 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 TAMM41Q96BW9 452 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 C7orf26Q96N11 449 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 CCDC28BQ9BUN5 200 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 MRPL13Q9BYD1 178 aaKnown RBP10.42□□□□□ -0.74
HDAC3-204ENST00000469207 DCAF16Q9NXF7 216 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 SLCO1C1Q9NYB5 712 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 ZNF229Q9UJW7 825 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 FBXL3Q9UKT7 428 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 TRIM33Q9UPN9 1127 aa10.42□□□□□ -0.74
HDAC3-204ENST00000469207 WNK2Q9Y3S1 2297 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 LOC100509620A0A075B734 347 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 SLC22A23A1A5C7 686 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 TRAPPC13A5PLN9 417 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 MGRN1O60291 552 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 TGDSO95455 350 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 SNAP29O95721 258 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 IGHV1-46P01743 117 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 IGHV3-13P01766 116 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 IGHG1P01857 330 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 ANPEPP15144 967 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 ZNF32P17041 273 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 FUT1P19526 365 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 DRD4P21917 467 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 FUT4P22083 530 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 ZFP36P26651 326 aaKnown RBP10.41□□□□□ -0.74
HDAC3-204ENST00000469207 ZNF81P51508 661 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 UGT2B15P54855 530 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 LCN2P80188 198 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 PLP2Q04941 152 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 FMODQ06828 376 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 RPL18Q07020 188 aaKnown RBP10.41□□□□□ -0.74
HDAC3-204ENST00000469207 DCAF12L2Q5VW00 463 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 USP43Q70EL4 1123 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms