RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 OSMP13725 252 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 B4GALT1P15291 398 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 HIST1H1CP16403 213 aaKnown RBP10.45□□□□□ -0.74
VPS13D-204ENST00000469054 ZNF23P17027 643 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 PAX7P23759 505 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 NOS3P29474 1203 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 CDKN2AP42771 156 aaKnown RBP10.45□□□□□ -0.74
VPS13D-204ENST00000469054 DAPP51397 102 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 ZNF84P51523 738 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 LCN6P62502 163 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 FMODQ06828 376 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 SLC36A3Q495N2 470 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 NRN1LQ496H8 165 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 FAHD1Q6P587 224 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 PTCHD4Q6ZW05 846 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 OR2T33Q8NG76 320 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 OR4K13Q8NH42 304 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 DNAJC9Q8WXX5 260 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 NSMAFQ92636 917 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 PKP2Q99959 881 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 SYT4Q9H2B2 425 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 TBC1D23Q9NUY8 699 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 TMEM38BQ9NVV0 291 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 NPAP1Q9NZP6 1156 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 VSX1Q9NZR4 365 aaPredicted RBP10.45□□□□□ -0.74
VPS13D-204ENST00000469054 BAIAP2Q9UQB8 552 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 HECTD1Q9ULT8 2610 aa10.45□□□□□ -0.74
VPS13D-204ENST00000469054 H3BN98 237 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 MGRN1O60291 552 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 FARS2O95363 451 aaKnown RBP10.44□□□□□ -0.74
VPS13D-204ENST00000469054 OR8G3PP0DMU2 310 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 LOXP28300 417 aaPredicted RBP10.44□□□□□ -0.74
VPS13D-204ENST00000469054 NR1H2P55055 460 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 SLC35F1Q5T1Q4 408 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 NCMAPQ5T1S8 102 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 FBXW10Q5XX13 1052 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 TMEM200AQ86VY9 491 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 JAZF1Q86VZ6 243 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 LNX2Q8N448 690 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 SLC22A24Q8N4F4 322 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 ICA1LQ8NDH6 482 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 OR4Q3Q8NH05 313 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 TEX47Q8TBZ9 253 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 PIK3IP1Q96FE7 263 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 PLPPR2Q96GM1 343 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 SNX18Q96RF0 628 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 NMNAT3Q96T66 252 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 C1QTNF6Q9BXI9 259 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 GABARAPL1Q9H0R8 117 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 CLEC4MQ9H2X3 399 aaPredicted RBP10.44□□□□□ -0.74
VPS13D-204ENST00000469054 ESRP2Q9H6T0 727 aaKnown RBP10.44□□□□□ -0.74
VPS13D-204ENST00000469054 PAPOLBQ9NRJ5 636 aaKnown RBP10.44□□□□□ -0.74
VPS13D-204ENST00000469054 KIF17Q9P2E2 1029 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 OAZ3Q9UMX2 235 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 UGT2A1Q9Y4X1 527 aa10.44□□□□□ -0.74
VPS13D-204ENST00000469054 ANKHD1Q8IWZ3 2542 aaKnown RBP10.43□□□□□ -0.74
VPS13D-204ENST00000469054 DPRXA6NFQ7 191 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 SAC3D1A6NKF1 404 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 KHDRBS3O75525 346 aaKnown RBP10.43□□□□□ -0.74
VPS13D-204ENST00000469054 RENP00797 406 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 CTLA4P16410 223 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 NPR2P20594 1047 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 POU1F1P28069 291 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 CRABP1P29762 137 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 GUCA1AP43080 201 aaPredicted RBP10.43□□□□□ -0.74
VPS13D-204ENST00000469054 CAPZA2P47755 286 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 GIPRP48546 466 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 ZNF83P51522 516 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 TUBA1BP68363 451 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 TUBA4AP68366 448 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 MRPS34P82930 218 aaKnown RBP10.43□□□□□ -0.74
VPS13D-204ENST00000469054 ETFDHQ16134 617 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 KDM4DQ6B0I6 523 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 LEG1Q6P5S2 330 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 TUBA1AQ71U36 451 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 SKA3Q8IX90 412 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 PARP8Q8N3A8 854 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 FAM169BQ8N8A8 192 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 NPEPL1Q8NDH3 523 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 OR52E2Q8NGJ4 325 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 NANOS1Q8WY41 292 aaKnown RBP10.43□□□□□ -0.74
VPS13D-204ENST00000469054 SIAEQ9HAT2 523 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 MOV10Q9HCE1 1003 aaKnown RBP10.43□□□□□ -0.74
VPS13D-204ENST00000469054 B3GNT2Q9NY97 397 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 ZNF224Q9NZL3 707 aa10.43□□□□□ -0.74
VPS13D-204ENST00000469054 CRNNQ9UBG3 495 aaPredicted RBP10.43□□□□□ -0.74
VPS13D-204ENST00000469054 OR6C68A6NDL8 312 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 ZNF503-AS2A6NEH8 195 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 M0R1B8 84 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 SLC16A7O60669 478 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 MITFO75030 526 aaPredicted RBP10.42□□□□□ -0.74
VPS13D-204ENST00000469054 UBL3O95164 117 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 IGKV3-15P01624 115 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 HLA-HP01893 362 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 CD3EP07766 207 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 CD79AP11912 226 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 CBR1P16152 277 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 PTAFRP25105 342 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 CD40P25942 277 aa10.42□□□□□ -0.74
VPS13D-204ENST00000469054 CDAP32320 146 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms