RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 LALBAP00709 142 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 OPN1MWP04001 364 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 OPN1MW2P0DN77 364 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 OPN1MW3P0DN78 364 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SPI1P17947 270 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 NME2P22392 152 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SRD5A2P31213 254 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 LCN6P62502 163 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 S100A12P80511 92 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ACKR1Q16570 336 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 CCDC58Q4VC31 144 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 EMC4Q5J8M3 183 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 RPUSD3Q6P087 351 aaKnown RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SSX6Q7RTT6 188 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 KCTD20Q7Z5Y7 419 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 TPRA1Q86W33 373 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 GID4Q8IVV7 300 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 OR6V1Q8N148 313 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 GHDCQ8N2G8 530 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 MIB2Q96AX9 1013 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ADGRG7Q96K78 797 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 UTP23Q9BRU9 249 aaKnown RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 OR2B2Q9GZK3 357 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 RNF32Q9H0A6 362 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF703Q9H7S9 590 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 WARS2Q9UGM6 360 aaKnown RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 L7N2F9 121 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF701M0R085 212 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SP1P08047 785 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 PITPNBP48739 271 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SLC25A1P53007 311 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SUCLG1P53597 346 aaKnown RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SCAND1P57086 179 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ZNF85Q03923 595 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 MFAP5Q13361 173 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 FAM189A2Q15884 450 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 AANATQ16613 207 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 HYAL4Q2M3T9 481 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 PXDC1Q5TGL8 231 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 OR2G6Q5TZ20 316 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 VASNQ6EMK4 673 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 USP43Q70EL4 1123 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 H1FNTQ75WM6 255 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 YRDCQ86U90 279 aaKnown RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 SVOPQ8N4V2 548 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 OR51L1Q8NGJ5 315 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 HAS2Q92819 552 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 RFKQ969G6 155 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 RNF166Q96A37 237 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 C12orf43Q96C57 262 aaKnown RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 TXNDC15Q96J42 360 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 PLEKHA8Q96JA3 519 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 TXNIPQ9H3M7 391 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ZFP64Q9NPA5 681 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 CHST11Q9NPF2 352 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ZC4H2Q9NQZ6 224 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ERVK13-1Q9NX77 482 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ALKBH4Q9NXW9 302 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 RSL24D1Q9UHA3 163 aaKnown RBP7.39□□□□□ -1.23
BRCA1-208ENST00000468300 ENPP5Q9UJA9 477 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 KCNMB2Q9Y691 235 aa7.39□□□□□ -1.23
BRCA1-208ENST00000468300 PRR32B1ATL7 298 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 LRRTM2O43300 516 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 TGFBR1P36897 503 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 RFC3P40938 356 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 HCCSP53701 268 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 CLDN20P56880 219 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 RPL27P61353 136 aaKnown RBP7.38□□□□□ -1.23
BRCA1-208ENST00000468300 OC90Q02509 493 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-208ENST00000468300 PUDPQ08623 228 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 TMEM176BQ3YBM2 270 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-208ENST00000468300 KLHL22Q53GT1 634 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 AGAP7PQ5VUJ5 663 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 LEG1Q6P5S2 330 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 ARIH2OSQ8N7S6 290 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 ADPRHL1Q8NDY3 354 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 PROKR2Q8NFJ6 384 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 OR51G2Q8NGK0 314 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 ASB10Q8WXI3 467 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 RORBQ92753 470 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 NXPE2Q96DL1 559 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 AGAP4Q96P64 663 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 FAM173AQ9BQD7 235 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 SCNM1Q9BWG6 230 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 SRXN1Q9BYN0 137 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 OR51V1Q9H2C8 321 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 TREM1Q9NP99 234 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 VSX1Q9NZR4 365 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-208ENST00000468300 KLHL13Q9P2N7 655 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 TRAPPC4Q9Y296 219 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 CORINQ9Y5Q5 1042 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 IGKV1D-43A0A0B4J1Z2 117 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 A0A0J9YW62 118 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 TMEM129A0AVI4 362 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 OR5H15A6NDH6 313 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 NPIPB13A6NJU9 1138 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 NPIPB4C9JG80 1138 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 RNF13O43567 381 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 SLC34A2O95436 690 aa7.38□□□□□ -1.23
BRCA1-208ENST00000468300 PMS2P2O95744 297 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms