RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 ADH7P40394 386 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 HSD11B2P80365 405 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 LTBQ06643 244 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 CD226Q15762 336 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 LYSMD4Q5XG99 296 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 NHLRC1Q6VVB1 395 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 DEFB123Q8N688 67 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 CLIP3Q96DZ5 547 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 LMF1Q96S06 567 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 LPAR4Q99677 370 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 SRA1Q9HD15 236 aaKnown RBP13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 CUTCQ9NTM9 273 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 RDH8Q9NYR8 311 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 STEAP1Q9UHE8 339 aa13.33□□□□□ -0.28
PRPF38B-204ENST00000467302 H0YC42 278 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 AKR7A3O95154 331 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 F13BP05160 661 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 ACSM4P0C7M7 580 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 ALOX5APP20292 161 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 MST1P26927 711 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 ARRB1P49407 418 aaPredicted RBP13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 SKP2Q13309 424 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 BIKQ13323 160 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 SERTAD2Q14140 314 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 MESTQ5EB52 335 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 EMC4Q5J8M3 183 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 ANKRD16Q6P6B7 361 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 CHMP1BQ7LBR1 199 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 OR51A4Q8NGJ6 313 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 OR52B4Q8NGK2 314 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 OR10AC1Q8NH08 325 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 ZNF417Q8TAU3 575 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 MCHR2Q969V1 340 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 PNPLA2Q96AD5 504 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 ZNF524Q96C55 264 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 ELF4Q99607 663 aaPredicted RBP13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 LAMP5Q9UJQ1 280 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 SPTBP11277 2137 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 hCG_1807616A0A1W2PRN6 198 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 TVP23AA6NH52 213 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 TMEM212A6NML5 194 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 ANXA2P2A6NMY6 339 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 TMEM150CB9EJG8 249 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 TPD52L2O43399 206 aaKnown RBP13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 RBBP9O75884 186 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 RGS11O94810 467 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 MAS1P04201 325 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 HIST1H2ABP04908 130 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 ANXA2P07355 339 aaKnown RBP13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 GALNSP34059 522 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 DLX5P56178 289 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 EGR3Q06889 387 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 BAMBIQ13145 260 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 RBMS2Q15434 407 aaKnown RBP13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 PCGF3Q3KNV8 242 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 TTLL10Q6ZVT0 673 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 HIST3H2AQ7L7L0 130 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 PRSS35Q8N3Z0 413 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 C10orf53Q8N6V4 93 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 GATSQ8NAP1 163 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 OR4C16Q8NGL9 310 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 HIST1H2ACQ93077 130 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 TMEM106AQ96A25 262 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 MVB12AQ96EY5 273 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 TSPAN32Q96QS1 320 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 OR1F2PQ96R84 312 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 MNTQ99583 582 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 SEMA4CQ9C0C4 833 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 WDR76Q9H967 626 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 MED9Q9NWA0 146 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 OPN4Q9UHM6 478 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 KCNMB2Q9Y691 235 aa13.32□□□□□ -0.28
PRPF38B-204ENST00000467302 PCDH15Q96QU1 1955 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 MFSD2BA6NFX1 497 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 GGT3PA6NGU5 568 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 HMSDA8MTL9 139 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 H7C1C5 153 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 SUSD5O60279 629 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 GIMD1P0DJR0 217 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 FAUP35544 74 aaKnown RBP13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 H2BFSP57053 126 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 SEC61A1P61619 476 aaKnown RBP13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 LCN6P62502 163 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 CFHR1Q03591 330 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 RPL18Q07020 188 aaKnown RBP13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 CBLN3Q6UW01 205 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 MED25Q71SY5 747 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 PRSS42Q7Z5A4 293 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 ZNF227Q86WZ6 799 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 GPR148Q8TDV2 347 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 KLHL15Q96M94 604 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 EXOSC3Q9NQT5 275 aaKnown RBP13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 SEMA5BQ9P283 1151 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 GRHPRQ9UBQ7 328 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 GMEB2Q9UKD1 530 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 IKZF2Q9UKS7 526 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 MPDZO75970 2070 aa13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 TNRC6BQ9UPQ9 1833 aaKnown RBP13.31□□□□□ -0.28
PRPF38B-204ENST00000467302 H3BMH7 237 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms