RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ASB10Q8WXI3 467 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 SEPHS2Q99611 448 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 PCDHAC1Q9H158 963 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 DENND2DQ9H6A0 471 aaPredicted RBP17.56■□□□□ 0.4
COL6A1-203ENST00000466285 G6PC2Q9NQR9 355 aa17.56■□□□□ 0.4
COL6A1-203ENST00000466285 FBP2O00757 339 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 LCKP06239 509 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 ZNF250P15622 560 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 CFPP27918 469 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 MPV17P39210 176 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 WNT5AP41221 380 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 KLF3P57682 345 aaPredicted RBP17.55■□□□□ 0.4
COL6A1-203ENST00000466285 SPATA46Q5T0L3 261 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 ZNF101Q8IZC7 436 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 CLDN22Q8N7P3 220 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 OR10A6Q8NH74 314 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 NABP1Q96AH0 204 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 NMD3Q96D46 503 aaKnown RBP17.55■□□□□ 0.4
COL6A1-203ENST00000466285 MRPL13Q9BYD1 178 aaKnown RBP17.55■□□□□ 0.4
COL6A1-203ENST00000466285 CDH20Q9HBT6 801 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 HINT3Q9NQE9 182 aaKnown RBP17.55■□□□□ 0.4
COL6A1-203ENST00000466285 METRNQ9UJH8 293 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 NDUFAF1Q9Y375 327 aa17.55■□□□□ 0.4
COL6A1-203ENST00000466285 BLOC1S5-TXNDC5H3BN57 136 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 FXYD1O00168 92 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 TRMUO75648 421 aaKnown RBP17.54■□□□□ 0.4
COL6A1-203ENST00000466285 TFP02787 698 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 AQP2P41181 271 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 CLRN1P58418 232 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 NFYCQ13952 458 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 RABL3Q5HYI8 236 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 SLC16A14Q7RTX9 510 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 SNX32Q86XE0 403 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 SYNPRQ8TBG9 265 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 HDAC2Q92769 488 aaKnown RBP17.54■□□□□ 0.4
COL6A1-203ENST00000466285 ATP6V1G3Q96LB4 118 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 ZNF665Q9H7R5 613 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 RNF121Q9H920 327 aa17.54■□□□□ 0.4
COL6A1-203ENST00000466285 ANGPT2O15123 496 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 MGRN1O60291 552 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 SNAP29O95721 258 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 BCL10O95999 233 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 IGHG1P01857 330 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 ADRA2CP18825 462 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 MAKP20794 623 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 MRPS11P82912 194 aaKnown RBP17.53■□□□□ 0.4
COL6A1-203ENST00000466285 TSTQ16762 297 aaKnown RBP17.53■□□□□ 0.4
COL6A1-203ENST00000466285 PABPC1L2AQ5JQF8 200 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 FAHD2BQ6P2I3 314 aaPredicted RBP17.53■□□□□ 0.4
COL6A1-203ENST00000466285 RFPL4BQ6ZWI9 263 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 USP51Q70EK9 711 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 RBM15BQ8NDT2 890 aaKnown RBP17.53■□□□□ 0.4
COL6A1-203ENST00000466285 OR51F2Q8NH61 342 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 IPCEF1Q8WWN9 437 aaPredicted RBP17.53■□□□□ 0.4
COL6A1-203ENST00000466285 FAHD2AQ96GK7 314 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 TMPRSS13Q9BYE2 586 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 PLA2G12AQ9BZM1 189 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 EVA1AQ9H8M9 152 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 DCAF16Q9NXF7 216 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 FBXL3Q9UKT7 428 aa17.53■□□□□ 0.4
COL6A1-203ENST00000466285 ZNF346Q9UL40 294 aaKnown RBP17.53■□□□□ 0.4
COL6A1-203ENST00000466285 ZSCAN5BA6NJL1 495 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 OR7A10O76100 309 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 ZNF32P17041 273 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 LSP1P33241 339 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 UCP2P55851 309 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 TMEM33P57088 247 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 VMACQ2NL98 169 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 ARMC4Q5T2S8 1044 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 TMEM53Q6P2H8 277 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 AKR7LQ8NHP1 331 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 ZNF416Q9BWM5 594 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 SLC19A3Q9BZV2 496 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 NANOGQ9H9S0 305 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 NPHS2Q9NP85 383 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 WIPI2Q9Y4P8 454 aa17.52■□□□□ 0.4
COL6A1-203ENST00000466285 LOC100509620A0A075B734 347 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 PLPP2O43688 288 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 FARS2O95363 451 aaKnown RBP17.51■□□□□ 0.39
COL6A1-203ENST00000466285 PNPP00491 289 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 OR1E2P47887 323 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 ZNF133P52736 654 aaPredicted RBP17.51■□□□□ 0.39
COL6A1-203ENST00000466285 TBC1D28Q2M2D7 210 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 SLC36A2Q495M3 483 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 C10orf128Q5T292 105 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 C12orf54Q6X4T0 127 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 PATL1Q86TB9 770 aaKnown RBP17.51■□□□□ 0.39
COL6A1-203ENST00000466285 OR1J1Q8NGS3 322 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 ZNF519Q8TB69 540 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 MPP4Q96JB8 637 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 GMPR2Q9P2T1 348 aaKnown RBP17.51■□□□□ 0.39
COL6A1-203ENST00000466285 SH3GLB1Q9Y371 365 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 GRIP1Q9Y3R0 1128 aa17.51■□□□□ 0.39
COL6A1-203ENST00000466285 IGHV1-69-2A0A0G2JMI3 117 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 MCIDASD6RGH6 385 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 MPZL1O95297 269 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 IGHV1-46P01743 117 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 IGHV2-5P01817 119 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 MT-ND1P03886 318 aa17.5■□□□□ 0.39
COL6A1-203ENST00000466285 TSPAN19P0C672 248 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms