RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ASB10Q8WXI3 467 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 KCTD12Q96CX2 325 aaKnown RBP16.37■□□□□ 0.21
COL9A3-205ENST00000466192 ORAI1Q96D31 301 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 KLHL15Q96M94 604 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 TTYH2Q9BSA4 534 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 P4HTMQ9NXG6 502 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 PCDHGA1Q9Y5H4 931 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 NCKAP5O14513 1909 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 TRAV1-2A0A0B4J238 106 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 A0A1W2PNR3 127 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 GPRIN2O60269 458 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 FZD7O75084 574 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 UPK3AO75631 287 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 GATBO75879 557 aaKnown RBP16.37■□□□□ 0.21
COL9A3-205ENST00000466192 KRT8P05787 483 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 UCHL1P09936 223 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 ALOX5APP20292 161 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 POU3F1Q03052 451 aaPredicted RBP16.37■□□□□ 0.21
COL9A3-205ENST00000466192 EIF3IQ13347 325 aaKnown RBP16.37■□□□□ 0.21
COL9A3-205ENST00000466192 TMEM164Q5U3C3 297 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 KCTD20Q7Z5Y7 419 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 RPS4Y2Q8TD47 263 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 HPS1Q92902 700 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 C5orf34Q96MH7 638 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 GNRHR2Q96P88 292 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 EXTL2Q9UBQ6 330 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 KCNG2Q9UJ96 466 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 B3GALT5Q9Y2C3 310 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 ZNF281Q9Y2X9 895 aa16.37■□□□□ 0.21
COL9A3-205ENST00000466192 EP300Q09472 2414 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-205ENST00000466192 NPIPA5E9PKD4 350 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 ADH6P28332 368 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 EIF1P41567 113 aaKnown RBP16.36■□□□□ 0.21
COL9A3-205ENST00000466192 HSF1Q00613 529 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 THOC7Q6I9Y2 204 aaKnown RBP16.36■□□□□ 0.21
COL9A3-205ENST00000466192 ESX1Q8N693 406 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 DTX3Q8N9I9 347 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 ZBTB8AQ96BR9 441 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 TXNDC15Q96J42 360 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 PARD6AQ9NPB6 346 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 NOX4Q9NPH5 578 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 MED29Q9NX70 200 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 ANKRD10Q9NXR5 420 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 NPIPA1Q9UND3 350 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 ACOD1A6NK06 481 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 ABHD16AO95870 558 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 EIF4EP06730 217 aaKnown RBP16.36■□□□□ 0.21
COL9A3-205ENST00000466192 HSD17B12Q53GQ0 312 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 H3F3CQ6NXT2 135 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 LRRC69Q6ZNQ3 347 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 SLC35D2Q76EJ3 337 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 LRRC28Q86X40 367 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-205ENST00000466192 UBE2J2Q8N2K1 259 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 TRMT10AQ8TBZ6 339 aaKnown RBP16.36■□□□□ 0.21
COL9A3-205ENST00000466192 OR5B2Q96R09 309 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 AMELYQ99218 206 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 FANCFQ9NPI8 374 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 SACM1LQ9NTJ5 587 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 MRPL22Q9NWU5 206 aaKnown RBP16.36■□□□□ 0.21
COL9A3-205ENST00000466192 FRRS1LQ9P0K9 344 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 B3GAT1Q9P2W7 334 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 RPH3AQ9Y2J0 694 aaPredicted RBP16.36■□□□□ 0.21
COL9A3-205ENST00000466192 AK6Q9Y3D8 172 aaKnown RBP16.36■□□□□ 0.21
COL9A3-205ENST00000466192 TMEM14AQ9Y6G1 99 aa16.36■□□□□ 0.21
COL9A3-205ENST00000466192 A0A1B0GTH9 108 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 A0A1B0GVC2 190 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 A6NIN4 97 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 NPIPB13A6NJU9 1138 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 NPIPB4C9JG80 1138 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 ZNF593O00488 134 aaPredicted RBP16.35■□□□□ 0.21
COL9A3-205ENST00000466192 LIFP15018 202 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 DPP4P27487 766 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 SFTPDP35247 375 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 DLSTP36957 453 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 DAP3P51398 398 aaKnown RBP16.35■□□□□ 0.21
COL9A3-205ENST00000466192 SELENBP1Q13228 472 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 ASAH1Q13510 395 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 YIF1BQ5BJH7 314 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 CEP78Q5JTW2 689 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 TRIQKQ629K1 86 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 OTOSQ8NHW6 89 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 RGP1Q92546 391 aaPredicted RBP16.35■□□□□ 0.21
COL9A3-205ENST00000466192 MNTQ99583 582 aa16.35■□□□□ 0.21
COL9A3-205ENST00000466192 A0A0B4J203 849 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 A0A0G2JMP0 313 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 A0A0X1KG70 313 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 A0A1W2PNV4 684 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 A6NIZ1 184 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 ZNF879B4DU55 563 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 TERTO14746 1132 aaKnown RBP16.34■□□□□ 0.21
COL9A3-205ENST00000466192 PIN1P1O15428 100 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 ATF1P18846 271 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 SRMP19623 302 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 P2RY4P51582 365 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 RAP1BP61224 184 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 RAP1AP62834 184 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 ALKBH1Q13686 389 aaKnown RBP16.34■□□□□ 0.21
COL9A3-205ENST00000466192 TRIP6Q15654 476 aaKnown RBP16.34■□□□□ 0.21
COL9A3-205ENST00000466192 UNQ9370/PRO34162Q6UXP9 181 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 NHLRC1Q6VVB1 395 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms