RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 RNF139Q8WU17 664 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 TPD52L3Q96J77 140 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 CNDP1Q96KN2 507 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 IFT74Q96LB3 600 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 KCTD14Q9BQ13 255 aaPredicted RBP2.25□□□□□ -2.05
SMC4-205ENST00000465563 TMEM59Q9BXS4 323 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 MRPL47Q9HD33 250 aaKnown RBP2.25□□□□□ -2.05
SMC4-205ENST00000465563 ETNK2Q9NVF9 386 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 IKZF2Q9UKS7 526 aa2.25□□□□□ -2.05
SMC4-205ENST00000465563 PACSIN2Q9UNF0 486 aaPredicted RBP2.25□□□□□ -2.05
SMC4-205ENST00000465563 YTHDF2Q9Y5A9 579 aaKnown RBP2.25□□□□□ -2.05
SMC4-205ENST00000465563 DENND4AQ7Z401 1863 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 CABIN1Q9Y6J0 2220 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 PLAC8L1A1L4L8 177 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 C17orf51A8MQB3 221 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 AP3B1O00203 1094 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 PSTPIP1O43586 416 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 MGRN1O60291 552 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 SS18L1O75177 396 aaPredicted RBP2.24□□□□□ -2.05
SMC4-205ENST00000465563 CTDNEP1O95476 244 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 ALDOBP05062 364 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 MCF2P10911 925 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 RFX3P48380 749 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 SUB1P53999 127 aaKnown RBP eCLIP2.24□□□□□ -2.05
SMC4-205ENST00000465563 GPX6P59796 221 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 ENPEPQ07075 957 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 SSX2Q16385 188 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 LCN12Q6JVE5 192 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 KDM7AQ6ZMT4 941 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 LRRC74BQ6ZQY2 392 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 TAS2R42Q7RTR8 314 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 ASCL5Q7RTU5 278 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 KCNG3Q8TAE7 436 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 RAB3IL1Q8TBN0 382 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 N4BP2L2Q92802 583 aaPredicted RBP2.24□□□□□ -2.05
SMC4-205ENST00000465563 TMEM54Q969K7 222 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 SGK3Q96BR1 496 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 ASB9Q96DX5 294 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 AURKBQ96GD4 344 aaPredicted RBP2.24□□□□□ -2.05
SMC4-205ENST00000465563 WFIKKN1Q96NZ8 548 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 TCHPQ9BT92 498 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 PKIBQ9C010 78 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 RACGAP1Q9H0H5 632 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 CWH43Q9H720 699 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 TM9SF3Q9HD45 589 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 CTPS2Q9NRF8 586 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 KLHL28Q9NXS3 571 aa2.24□□□□□ -2.05
SMC4-205ENST00000465563 RRP15Q9Y3B9 282 aaKnown RBP2.24□□□□□ -2.05
SMC4-205ENST00000465563 MSH6P52701 1360 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 CEMIPQ8WUJ3 1361 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 MROH7-TTC4A0A0A0MT08 1334 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 TRIM64CA6NLI5 447 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 GOSR2O14653 212 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 SUPT3HO75486 399 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 TSPAN13O95857 204 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 CSF3P09919 207 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 SMIM10L1P0DMW3 83 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 FOLR1P15328 257 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 ATP5C1P36542 298 aaKnown RBP2.23□□□□□ -2.05
SMC4-205ENST00000465563 NMUP48645 174 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 PRMT2P55345 433 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 ATP5IP56385 69 aaPredicted RBP2.23□□□□□ -2.05
SMC4-205ENST00000465563 MEF2BQ02080 365 aaPredicted RBP2.23□□□□□ -2.05
SMC4-205ENST00000465563 ZNF92Q03936 586 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 ARHGAP19Q14CB8 494 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 RNASEKQ6P5S7 137 aaKnown RBP2.23□□□□□ -2.05
SMC4-205ENST00000465563 CNIH2Q6PI25 160 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 SASS6Q6UVJ0 657 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 TMEM107Q6UX40 140 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 BRD3OSQ6XYD6 125 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 LINC00173Q6ZV60 143 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 NIPA1Q7RTP0 329 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 TMEM135Q86UB9 458 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 STPG2Q8N412 459 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 HSD17B11Q8NBQ5 300 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 DTX3LQ8TDB6 740 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 MCOLN3Q8TDD5 553 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 RASD2Q96D21 266 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 SMIM10Q96HG1 83 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 HSFY1Q96LI6 401 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 RARRES2Q99969 163 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 SLC2A8Q9NY64 477 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 ZNF226Q9NYT6 803 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 GNPTGQ9UJJ9 305 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 STARD10Q9Y365 291 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 PDS5BQ9NTI5 1447 aa2.23□□□□□ -2.05
SMC4-205ENST00000465563 ZNF233A6NK53 670 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 MRPS12O15235 138 aaKnown RBP2.22□□□□□ -2.05
SMC4-205ENST00000465563 EIF3GO75821 320 aaKnown RBP eCLIP2.22□□□□□ -2.05
SMC4-205ENST00000465563 BGLAPP02818 100 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 SERPIND1P05546 499 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 HPGDP15428 266 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 ZNF30P17039 623 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 OMGP23515 440 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 CCR8P51685 355 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 NCBP2P52298 156 aaKnown RBP eCLIP2.22□□□□□ -2.05
SMC4-205ENST00000465563 UGT2B15P54855 530 aa2.22□□□□□ -2.05
SMC4-205ENST00000465563 RPS21P63220 83 aaKnown RBP2.22□□□□□ -2.05
SMC4-205ENST00000465563 MRPS22P82650 360 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms