RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ABCA4P78363 2273 aa14.83□□□□□ -0.03
USP39-211ENST00000465282 APCP25054 2843 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 SOCS2O14508 198 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 FARS2O95363 451 aaKnown RBP14.83□□□□□ -0.04
USP39-211ENST00000465282 TP53P04637 393 aaPredicted RBP14.83□□□□□ -0.04
USP39-211ENST00000465282 OR8G3PP0DMU2 310 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 PRKACGP22612 351 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 MRPS34P82930 218 aaKnown RBP14.83□□□□□ -0.04
USP39-211ENST00000465282 HIKESHIQ53FT3 197 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 PARP8Q8N3A8 854 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 OR52N5Q8NH56 324 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 NANOS1Q8WY41 292 aaKnown RBP14.83□□□□□ -0.04
USP39-211ENST00000465282 RASD2Q96D21 266 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 TSSK6Q9BXA6 273 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 NELFAQ9H3P2 528 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 PAPOLBQ9NRJ5 636 aaKnown RBP14.83□□□□□ -0.04
USP39-211ENST00000465282 CACNA1DQ01668 2161 aa14.83□□□□□ -0.04
USP39-211ENST00000465282 ITPR2Q14571 2701 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 A0A096LPE4 126 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 A0A1W2PPZ6 126 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 DEFB108AA8MXU0 73 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 H3BN98 237 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 RENP00797 406 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 HRGP04196 525 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 CRABP1P29762 137 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 MYBPC1Q00872 1141 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 CLEC12AQ5QGZ9 265 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 DNM1P34Q6PK57 102 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 SEZ6L2Q6UXD5 910 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 TMEM108Q6UXF1 575 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 JAZF1Q86VZ6 243 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 SLC22A24Q8N4F4 322 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 OR8D4Q8NGM9 314 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 PKP2Q99959 881 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 TEX12Q9BXU0 123 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 PLA2G12AQ9BZM1 189 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 SIAEQ9HAT2 523 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 FBXL3Q9UKT7 428 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 NBPF19A0A087WUL8 3843 aa14.82□□□□□ -0.04
USP39-211ENST00000465282 HRNRQ86YZ3 2850 aaPredicted RBP14.81□□□□□ -0.04
USP39-211ENST00000465282 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.81□□□□□ -0.04
USP39-211ENST00000465282 CYSRT1A8MQ03 144 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 UBL3O95164 117 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 SOX14O95416 240 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 IFNGP01579 166 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 HIST1H1CP16403 213 aaKnown RBP14.81□□□□□ -0.04
USP39-211ENST00000465282 PTAFRP25105 342 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 CDKN2AP42771 156 aaKnown RBP14.81□□□□□ -0.04
USP39-211ENST00000465282 DAPP51397 102 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 ESRRGP62508 458 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 SLC36A3Q495N2 470 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 NCMAPQ5T1S8 102 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 FBXW10Q5XX13 1052 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 KDM4DQ6B0I6 523 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 SLC27A4Q6P1M0 643 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 FOXL2NBQ6ZUU3 175 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 RADILQ96JH8 1075 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 WACQ9BTA9 647 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 SYT4Q9H2B2 425 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 SEMA6AQ9H2E6 1030 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 CRNNQ9UBG3 495 aaPredicted RBP14.81□□□□□ -0.04
USP39-211ENST00000465282 KLHL21Q9UJP4 597 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 OAZ3Q9UMX2 235 aa14.81□□□□□ -0.04
USP39-211ENST00000465282 KHDRBS3O75525 346 aaKnown RBP14.8□□□□□ -0.04
USP39-211ENST00000465282 SLC2A10O95528 541 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 B4GALT1P15291 398 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 CBR1P16152 277 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 GRK5P34947 590 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 ARR3P36575 388 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 GIPRP48546 466 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 FMODQ06828 376 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 FAM27BQ5VT28 67 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 LEG1Q6P5S2 330 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 PTCHD4Q6ZW05 846 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 PQLC1Q8N2U9 271 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 IL17RDQ8NFM7 739 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 OR52E2Q8NGJ4 325 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 OR4K13Q8NH42 304 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 PIK3IP1Q96FE7 263 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 PLPPR2Q96GM1 343 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 RBM4BQ9BQ04 359 aaKnown RBP14.8□□□□□ -0.04
USP39-211ENST00000465282 RBM4Q9BWF3 364 aaKnown RBP14.8□□□□□ -0.04
USP39-211ENST00000465282 KCNN2Q9H2S1 579 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 CLEC4MQ9H2X3 399 aaPredicted RBP14.8□□□□□ -0.04
USP39-211ENST00000465282 KRT84Q9NSB2 600 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 B3GNT2Q9NY97 397 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 UGT2A1Q9Y4X1 527 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 LRBAP50851 2863 aa14.8□□□□□ -0.04
USP39-211ENST00000465282 IGKV1D-43A0A0B4J1Z2 117 aa14.79□□□□□ -0.04
USP39-211ENST00000465282 SIAH2O43255 324 aa14.79□□□□□ -0.04
USP39-211ENST00000465282 IGKV3-15P01624 115 aa14.79□□□□□ -0.04
USP39-211ENST00000465282 HMGN1P05114 100 aa14.79□□□□□ -0.04
USP39-211ENST00000465282 CD3EP07766 207 aa14.79□□□□□ -0.04
USP39-211ENST00000465282 PRF1P14222 555 aa14.79□□□□□ -0.04
USP39-211ENST00000465282 CDK5Q00535 292 aa14.79□□□□□ -0.04
USP39-211ENST00000465282 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.79□□□□□ -0.04
USP39-211ENST00000465282 GSG1Q2KHT4 349 aa14.79□□□□□ -0.04
USP39-211ENST00000465282 PGGHGQ32M88 737 aa14.79□□□□□ -0.04
USP39-211ENST00000465282 SLC36A2Q495M3 483 aa14.79□□□□□ -0.04
USP39-211ENST00000465282 ZNF362Q5T0B9 420 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms