RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PRSS42	Q7Z5A4	293 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SCD5	Q86SK9	330 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ANKRD46	Q86W74	232 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	AMIGO1	Q86WK6	493 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	HOGA1	Q86XE5	327 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DEFB106A	Q8N104	65 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MARVELD2	Q8N4S9	558 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PQLC3	Q8N755	202 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	OR1L3	Q8NH93	324 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MAGEE2	Q8TD90	523 aa	Predicted RBP	4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DTX3L	Q8TDB6	740 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DTD1	Q8TEA8	209 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	FAM172A	Q8WUF8	416 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MITD1	Q8WV92	249 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	STMN2	Q93045	179 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TSACC	Q96A04	125 aa	Predicted RBP	4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SGTB	Q96EQ0	304 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	RNF157	Q96PX1	679 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MAP3K3	Q99759	626 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SNRNP25	Q9BV90	132 aa	Known RBP	4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ULBP1	Q9BZM6	244 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	GAL3ST2	Q9H3Q3	398 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	RIBC2	Q9H4K1	309 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MAT2B	Q9NZL9	334 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DNAJB9	Q9UBS3	223 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	NEU3	Q9UQ49	428 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SCML2	Q9UQR0	700 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	NCKAP1	Q9Y2A7	1128 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SPACA6	W5XKT8	324 aa		4.27	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MDC1	Q14676	2089 aa	Known RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278		A0A087X002	238 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TRBV5-5	A0A0J9YX44	114 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ISPD	A4D126	451 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	LINC00862	A6NCI5	91 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ARHGAP42	A6NI28	874 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278		E7ESA3	106 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	C19orf84	I3L1E1	186 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278		I3L4J1	428 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PGLS	O95336	258 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	F10	P00742	488 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	IGLV3-27	P01718	113 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CDK1	P06493	297 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CRH	P06850	196 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ANKRD34C	P0C6C1	535 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	F3	P13726	295 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	HMGA1	P17096	107 aa	Known RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CD82	P27701	267 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PRDX6	P30041	224 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DUT	P33316	252 aa	Known RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	RCVRN	P35243	200 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	RORA	P35398	523 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	UGT1A3	P35503	534 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ATP5C1	P36542	298 aa	Known RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	KCNJ1	P48048	391 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ARRB1	P49407	418 aa	Predicted RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DNA2	P51530	1060 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ATP5I	P56385	69 aa	Predicted RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ARF6	P62330	175 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	REEP5	Q00765	189 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ELP6	Q0PNE2	266 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TWF1	Q12792	350 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	STX4	Q12846	297 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	IL24	Q13007	206 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	EIF3I	Q13347	325 aa	Known RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TFDP2	Q14188	446 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	OPCML	Q14982	345 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PAFAH1B3	Q15102	231 aa	Known RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TOMM34	Q15785	309 aa	Predicted RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CDKL4	Q5MAI5	379 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MLIP	Q5VWP3	458 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	BSPRY	Q5W0U4	402 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	LRRC66	Q68CR7	880 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	FAM166A	Q6J272	317 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CCDC137	Q6PK04	289 aa	Known RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SLC25A47	Q6Q0C1	308 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	LRRC74B	Q6ZQY2	392 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	SMIM15	Q7Z3B0	74 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TRMT11	Q7Z4G4	463 aa	Known RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	KLHL7	Q8IXQ5	586 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ZNF683	Q8IZ20	524 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	RTL3	Q8N8U3	475 aa	Known RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	LRTM2	Q8N967	370 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MFSD9	Q8NBP5	474 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ACBD4	Q8NC06	268 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TMEM104	Q8NE00	496 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MAPK15	Q8TD08	544 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	BLOC1S5	Q8TDH9	187 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	CD300LF	Q8TDQ1	290 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MRGPRD	Q8TDS7	321 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	PIK3R3	Q92569	461 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	NR4A3	Q92570	626 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	DYRK2	Q92630	601 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ART4	Q93070	314 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	FAM162A	Q96A26	154 aa		4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	MAGOHB	Q96A72	148 aa	Known RBP	4.26	□□□□□ -1.73
CACNA1C-223	ENST00000465278	ISG20	Q96AZ6	181 aa	Known RBP	4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms