RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 SHARPINQ9H0F6 387 aa17.66■□□□□ 0.42
PDLIM4-205ENST00000463615 A4GNTQ9UNA3 340 aa17.66■□□□□ 0.42
PDLIM4-205ENST00000463615 HIF3AQ9Y2N7 669 aa17.66■□□□□ 0.42
PDLIM4-205ENST00000463615 LOC100289279A0A1B0GTE1 492 aa17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 SH3PXD2BA1X283 911 aa17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 PTHP01270 115 aa17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 MMP7P09237 267 aaPredicted RBP17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 ZNF84P51523 738 aa17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 CHN2P52757 468 aa17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 MRPS34P82930 218 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 LRRC23Q53EV4 343 aaPredicted RBP17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 GKAP1Q5VSY0 366 aaPredicted RBP17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 SLC30A7Q8NEW0 376 aa17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 SH3GL3Q99963 347 aa17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 CMTM6Q9NX76 183 aa17.65■□□□□ 0.42
PDLIM4-205ENST00000463615 MCIDASD6RGH6 385 aa17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 SHOX2O60902 331 aaPredicted RBP17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 NR2C1P13056 603 aa17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 MRPS11P82912 194 aaKnown RBP17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 GUCY1A3Q02108 690 aa17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 SLC16A14Q7RTX9 510 aa17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 SLC15A3Q8IY34 581 aa17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 MOSPD2Q8NHP6 518 aa17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 LZICQ8WZA0 190 aa17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 RCN3Q96D15 328 aa17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 TXNIPQ9H3M7 391 aa17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 SIAEQ9HAT2 523 aa17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 ZNF346Q9UL40 294 aaKnown RBP17.64■□□□□ 0.41
PDLIM4-205ENST00000463615 SVEP1Q4LDE5 3571 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 IGLV3-9A0A075B6K5 115 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 GMNCA6NCL1 334 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 IGHMP01871 453 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 ZNF250P15622 560 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 IFNA8P32881 189 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 ANKDD1AQ495B1 522 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 ELFN2Q5R3F8 820 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 C8orf82Q6P1X6 216 aaPredicted RBP17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 UGT2A3Q6UWM9 527 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 LRP11Q86VZ4 500 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 OFCC1Q8IZS5 231 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 OR1J2Q8NGS2 313 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 FNDC8Q8TC99 324 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 SYT3Q9BQG1 590 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 SOX7Q9BT81 388 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 ARMCX1Q9P291 453 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 MYEF2Q9P2K5 600 aaKnown RBP17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 UGT2A1Q9Y4X1 527 aa17.63■□□□□ 0.41
PDLIM4-205ENST00000463615 LAPTM4AQ15012 233 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 FAM120AOSQ5T036 256 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 RGS7BPQ6MZT1 257 aaPredicted RBP17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 PAQR4Q8N4S7 273 aaPredicted RBP17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 ARIH2OSQ8N7S6 290 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 SYT14Q8NB59 555 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 FAM156AQ8NDB6 213 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 TMEM158Q8WZ71 300 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 HDAC2Q92769 488 aaKnown RBP17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 NABP1Q96AH0 204 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 BPIFA2Q96DR5 249 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 TPD52L3Q96J77 140 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 HOPXQ9BPY8 73 aaPredicted RBP17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 ALG12Q9BV10 488 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 TPK1Q9H3S4 243 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 RNF121Q9H920 327 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 CHODLQ9H9P2 273 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 MAN2C1Q9NTJ4 1040 aa17.62■□□□□ 0.41
PDLIM4-205ENST00000463615 LRP5LA4QPB2 252 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 TGFAP01135 160 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 ACHEP22303 614 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 ALDH3B1P43353 468 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 SEC24CP53992 1094 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 MYBPC1Q00872 1141 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 PLP2Q04941 152 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 SF3A3Q12874 501 aaKnown RBP eCLIP17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 FHL1Q13642 323 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 TBC1D28Q2M2D7 210 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 ALG10Q5BKT4 473 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 FAM205BPQ63HN1 556 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 SLC25A47Q6Q0C1 308 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 HACD2Q6Y1H2 254 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 RNF113BQ8IZP6 322 aaKnown RBP17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 POU5F2Q8N7G0 328 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 LRRC75AQ8NAA5 344 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 RBM15BQ8NDT2 890 aaKnown RBP17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 ZNF519Q8TB69 540 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 RDH5Q92781 318 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 BCL2L14Q9BZR8 327 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 RACGAP1Q9H0H5 632 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 LRMDAQ9H2I8 198 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 CDH20Q9HBT6 801 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 MED4Q9NPJ6 270 aa17.61■□□□□ 0.41
PDLIM4-205ENST00000463615 IQCMA0A1B0GVH7 501 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 RNF212BA8MTL3 300 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 PHF1O43189 567 aaPredicted RBP17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 PIP5K1CO60331 668 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 CCDC22O60826 627 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 HPXP02790 462 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 IFNW1P05000 195 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 COX4I1P13073 169 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 IFI30P13284 250 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 MDH1P40925 334 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms