RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 OSBPL10Q9BXB5 764 aa17.33■□□□□ 0.36
COL9A3-204ENST00000463487 TMEM38BQ9NVV0 291 aa17.33■□□□□ 0.36
COL9A3-204ENST00000463487 A0A1W2PR80 420 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 SLC22A23A1A5C7 686 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 FAM221AA4D161 298 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 DEFB108AA8MXU0 73 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 SEC14L2O76054 403 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 UBL3O95164 117 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 SLC2A10O95528 541 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 IFNGP01579 166 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 HRGP04196 525 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 CD3EP07766 207 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 PRKACGP22612 351 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 PTAFRP25105 342 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 HS3ST5Q8IZT8 346 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 SLC22A24Q8N4F4 322 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 WDR31Q8NA23 367 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 NSMAFQ92636 917 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 KCNS3Q9BQ31 491 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 PAPOLBQ9NRJ5 636 aaKnown RBP17.32■□□□□ 0.36
COL9A3-204ENST00000463487 VSX1Q9NZR4 365 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-204ENST00000463487 FBXL3Q9UKT7 428 aa17.32■□□□□ 0.36
COL9A3-204ENST00000463487 FLNBO75369 2602 aaKnown RBP17.31■□□□□ 0.36
COL9A3-204ENST00000463487 H7C1C5 153 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 M0R1B8 84 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 BHLHE40O14503 412 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 CD79AP11912 226 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 OSMP13725 252 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 ARR3P36575 388 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 ZNF83P51522 516 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 LCN6P62502 163 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 MRPS34P82930 218 aaKnown RBP17.31■□□□□ 0.36
COL9A3-204ENST00000463487 FMODQ06828 376 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 GSG1Q2KHT4 349 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 SLC36A3Q495N2 470 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 LEG1Q6P5S2 330 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 SLC25A47Q6Q0C1 308 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 DEPDC4Q8N2C3 294 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 FAM169BQ8N8A8 192 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 ICA1LQ8NDH6 482 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 NMD3Q96D46 503 aaKnown RBP17.31■□□□□ 0.36
COL9A3-204ENST00000463487 RADILQ96JH8 1075 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 SYT4Q9H2B2 425 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 SEMA6AQ9H2E6 1030 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 NELFAQ9H3P2 528 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 S100A14Q9HCY8 104 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 KRT84Q9NSB2 600 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 KLHL21Q9UJP4 597 aa17.31■□□□□ 0.36
COL9A3-204ENST00000463487 A0A1W2PPL8 197 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 ERICH4A6NGS2 130 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 SLC16A7O60669 478 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 KHDRBS3O75525 346 aaKnown RBP17.3■□□□□ 0.36
COL9A3-204ENST00000463487 RAB36O95755 333 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 HIST1H1CP16403 213 aaKnown RBP17.3■□□□□ 0.36
COL9A3-204ENST00000463487 POU1F1P28069 291 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 C3orf36Q3SXR2 165 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 SLC36A2Q495M3 483 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 NCMAPQ5T1S8 102 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 SLC27A4Q6P1M0 643 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 FAHD1Q6P587 224 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 SLC16A14Q7RTX9 510 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 PARP8Q8N3A8 854 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 LNX2Q8N448 690 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 OR52E2Q8NGJ4 325 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 PLA2G12AQ9BZM1 189 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 GABARAPL1Q9H0R8 117 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 SEC61A2Q9H9S3 476 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 SIAEQ9HAT2 523 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 OAZ3Q9UMX2 235 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 RNF115Q9Y4L5 304 aa17.3■□□□□ 0.36
COL9A3-204ENST00000463487 RIIAD1A6NNX1 92 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 H3BNX3 289 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 PRF1P14222 555 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 CBR1P16152 277 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 BSPH1Q075Z2 132 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.29■□□□□ 0.36
COL9A3-204ENST00000463487 SGCAQ16586 387 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 PGGHGQ32M88 737 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 SLC35F1Q5T1Q4 408 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 TMEM53Q6P2H8 277 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 OR8D4Q8NGM9 314 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 OR4K13Q8NH42 304 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 NMNAT3Q96T66 252 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 PKP2Q99959 881 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 C1QTNF6Q9BXI9 259 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 PRRG3Q9BZD7 231 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 RERGLQ9H628 205 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 CCNB1IP1Q9NPC3 277 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 REV1Q9UBZ9 1251 aa17.29■□□□□ 0.36
COL9A3-204ENST00000463487 HLA-HP01893 362 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 ZNF3P17036 446 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 MSR1P21757 451 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 CD40P25942 277 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 GRK5P34947 590 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 CDKN2AP42771 156 aaKnown RBP17.28■□□□□ 0.36
COL9A3-204ENST00000463487 PCBD1P61457 104 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 SEZ6L2Q6UXD5 910 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 PTCHD4Q6ZW05 846 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 CDC20BQ86Y33 519 aa17.28■□□□□ 0.36
COL9A3-204ENST00000463487 GLB1L2Q8IW92 636 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms