RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 MCIDASD6RGH6 385 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 GSTA4O15217 222 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 SHOX2O60902 331 aaPredicted RBP6.27□□□□□ -1.41
PTPRF-210ENST00000463041 IGFBP1P08833 259 aaPredicted RBP6.27□□□□□ -1.41
PTPRF-210ENST00000463041 TACSTD2P09758 323 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 PATE4P0C8F1 98 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 FAM157CP0CG43 387 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 NR2C1P13056 603 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 COX4I1P13073 169 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 APEHP13798 732 aaKnown RBP6.27□□□□□ -1.41
PTPRF-210ENST00000463041 THBS2P35442 1172 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 GUCA1AP43080 201 aaPredicted RBP6.27□□□□□ -1.41
PTPRF-210ENST00000463041 RAD52P43351 418 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 LIPEQ05469 1076 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 RUNX1T1Q06455 604 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 TRAM2Q15035 370 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 CARTPTQ16568 116 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 MOGQ16653 247 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 LRRC23Q53EV4 343 aaPredicted RBP6.27□□□□□ -1.41
PTPRF-210ENST00000463041 THEM4Q5T1C6 240 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 C10orf128Q5T292 105 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 ARMC4Q5T2S8 1044 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 FAM166AQ6J272 317 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 HACD2Q6Y1H2 254 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 SLC16A14Q7RTX9 510 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 ZNF584Q8IVC4 421 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 CDK20Q8IZL9 346 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 ZCCHC24Q8N2G6 241 aaKnown RBP6.27□□□□□ -1.41
PTPRF-210ENST00000463041 POU5F2Q8N7G0 328 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 SYT14Q8NB59 555 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 SLC30A7Q8NEW0 376 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 OR4K5Q8NGD3 323 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 SPATA3Q8NHX4 192 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 FGFBP3Q8TAT2 258 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 ASB10Q8WXI3 467 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 C11orf40Q8WZ69 217 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 HPS1Q92902 700 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 BPIFA2Q96DR5 249 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 PRRC1Q96M27 445 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 ZNF347Q96SE7 839 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 FNDC11Q9BVV2 318 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 MRPL37Q9BZE1 423 aaKnown RBP6.27□□□□□ -1.41
PTPRF-210ENST00000463041 SMURF2Q9HAU4 748 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 C20orf141Q9NUB4 165 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 ARMCX1Q9P291 453 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 DUSP13Q9UII6 198 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 ZNF346Q9UL40 294 aaKnown RBP6.27□□□□□ -1.41
PTPRF-210ENST00000463041 A4GNTQ9UNA3 340 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 HIF3AQ9Y2N7 669 aa6.27□□□□□ -1.41
PTPRF-210ENST00000463041 DOCK11Q5JSL3 2073 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 IGHV4-61A0A0C4DH41 118 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 LOC100289279A0A1B0GTE1 492 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 M0R233 179 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 CXCR6O00574 342 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 LILRA1O75019 489 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 SNAP29O95721 258 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 IFNW1P05000 195 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 IFI30P13284 250 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 ZNF250P15622 560 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 SLC9A3P48764 834 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 CHN2P52757 468 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 UCP2P55851 309 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 TMEM33P57088 247 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 CTXN1P60606 82 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 RPL27P61353 136 aaKnown RBP6.26□□□□□ -1.41
PTPRF-210ENST00000463041 MRPS11P82912 194 aaKnown RBP6.26□□□□□ -1.41
PTPRF-210ENST00000463041 MRPS34P82930 218 aaKnown RBP6.26□□□□□ -1.41
PTPRF-210ENST00000463041 MYBPC1Q00872 1141 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 PRKCDQ05655 676 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 RIN1Q13671 783 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 MSMPQ1L6U9 139 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 TBC1D28Q2M2D7 210 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 IFI44LQ53G44 452 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 ALG10Q5BKT4 473 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 FAM27BQ5VT28 67 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 FAM205BPQ63HN1 556 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 RGS7BPQ6MZT1 257 aaPredicted RBP6.26□□□□□ -1.41
PTPRF-210ENST00000463041 C8orf82Q6P1X6 216 aaPredicted RBP6.26□□□□□ -1.41
PTPRF-210ENST00000463041 SLC25A47Q6Q0C1 308 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 UNQ6126/PRO20091Q6UXV3 157 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 FKBP9P1Q75LS8 142 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 CBLL1Q75N03 491 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 RRM2BQ7LG56 351 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 LRP11Q86VZ4 500 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 C1orf174Q8IYL3 243 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 RBM15BQ8NDT2 890 aaKnown RBP6.26□□□□□ -1.41
PTPRF-210ENST00000463041 NOXO1Q8NFA2 376 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 MOSPD2Q8NHP6 518 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 ZNF519Q8TB69 540 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 SYNPRQ8TBG9 265 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 GEMIN6Q8WXD5 167 aaKnown RBP6.26□□□□□ -1.41
PTPRF-210ENST00000463041 ACOT11Q8WXI4 607 aaPredicted RBP6.26□□□□□ -1.41
PTPRF-210ENST00000463041 RDH5Q92781 318 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 NMD3Q96D46 503 aaKnown RBP6.26□□□□□ -1.41
PTPRF-210ENST00000463041 MSI2Q96DH6 328 aaKnown RBP6.26□□□□□ -1.41
PTPRF-210ENST00000463041 CMTM5Q96DZ9 223 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 WACQ9BTA9 647 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 ALG12Q9BV10 488 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 BCL2L14Q9BZR8 327 aa6.26□□□□□ -1.41
PTPRF-210ENST00000463041 BPESC1Q9GZL8 116 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms