RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 NBEAL1Q6ZS30 2694 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.17□□□□□ -0.38e-11■■■□□ 18.8
SKA3-204ENST00000462482 FAM157AC9JC47 383 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 CDC14BO60729 498 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 NCR1O76036 304 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 SNAP29O95721 258 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 CLPTM1O96005 669 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 PNPP00491 289 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 PGA4P0DJD7 388 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 PGA3P0DJD8 388 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 NR2C1P13056 603 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 MAGEB1P43366 347 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 DAP3P51398 398 aaKnown RBP13.17□□□□□ -0.3
SKA3-204ENST00000462482 UCP2P55851 309 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 MTPNP58546 118 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 CCL8P80075 99 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 PTOV1Q86YD1 416 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 ZNF584Q8IVC4 421 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 WDFY1Q8IWB7 410 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 FGFBP3Q8TAT2 258 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 JMJD8Q96S16 334 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 CCNB1IP1Q9NPC3 277 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 NKIRAS2Q9NYR9 191 aa13.17□□□□□ -0.3
SKA3-204ENST00000462482 IGHV1-69-2A0A0G2JMI3 117 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 CENPBD1B2RD01 187 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 CLDN25C9JDP6 229 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 RP2O75695 350 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 CCL2P13500 99 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 ZNF250P15622 560 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 GCH1P30793 250 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 PCGF2P35227 344 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 MVKQ03426 396 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 HFEQ30201 348 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 BEND6Q5SZJ8 279 aaPredicted RBP13.16□□□□□ -0.3
SKA3-204ENST00000462482 THSD4Q6ZMP0 1018 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 DPP10Q8N608 796 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 LRRC17Q8N6Y2 441 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 GPR32P1Q8NGA4 272 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 RAB1CQ92928 201 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 MCHR2Q969V1 340 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 ZNF665Q9H7R5 613 aa13.16□□□□□ -0.3
SKA3-204ENST00000462482 EIF3KQ9UBQ5 218 aaKnown RBP13.16□□□□□ -0.3
SKA3-204ENST00000462482 IGLV3-9A0A075B6K5 115 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 A0A0G2JMP0 313 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 A0A0X1KG70 313 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 PLSCR5A0PG75 271 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 GMNCA6NCL1 334 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 TRIM77I1YAP6 450 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 VENTXO95231 258 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 ASAH2BP0C7U1 165 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 CCNOP22674 350 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 GUCA1AP43080 201 aaPredicted RBP13.15□□□□□ -0.3
SKA3-204ENST00000462482 CRYBB2P43320 205 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 LMO4P61968 165 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 RUNX1T1Q06455 604 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 FAM209AQ5JX71 171 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 AVPI1Q5T686 147 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 TREML1Q86YW5 311 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 RBM45Q8IUH3 476 aaKnown RBP13.15□□□□□ -0.3
SKA3-204ENST00000462482 LRRC18Q8N456 261 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 PAQR4Q8N4S7 273 aaPredicted RBP13.15□□□□□ -0.3
SKA3-204ENST00000462482 SYT14Q8NB59 555 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 CPEB3Q8NE35 698 aaKnown RBP13.15□□□□□ -0.3
SKA3-204ENST00000462482 NOXO1Q8NFA2 376 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 OR4M2Q8NGB6 313 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 OR1J1Q8NGS3 322 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 TSPEARQ8WU66 669 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 GCDHQ92947 438 aaPredicted RBP13.15□□□□□ -0.3
SKA3-204ENST00000462482 ZNF347Q96SE7 839 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 SH3GL1Q99961 368 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 PCDHAC1Q9H158 963 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 KAT8Q9H7Z6 458 aaKnown RBP13.15□□□□□ -0.3
SKA3-204ENST00000462482 SAP30LQ9HAJ7 183 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 INIPQ9NRY2 104 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 BAG5Q9UL15 447 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 PCDHB10Q9UN67 800 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 MALRD1Q5VYJ5 2156 aa13.15□□□□□ -0.3
SKA3-204ENST00000462482 WNT9BO14905 357 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 MPZL1O95297 269 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 IFNA14P01570 189 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 MT-ND1P03886 318 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 THY1P04216 161 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 F13BP05160 661 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 ACADSP16219 412 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 FUT1P19526 365 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 EPHA1P21709 976 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 RBM34P42696 430 aaKnown RBP13.14□□□□□ -0.31
SKA3-204ENST00000462482 TAS2R41P59536 307 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 CYLC2Q14093 348 aaPredicted RBP13.14□□□□□ -0.31
SKA3-204ENST00000462482 TSTQ16762 297 aaKnown RBP13.14□□□□□ -0.31
SKA3-204ENST00000462482 ZNF718Q3SXZ3 478 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 USP51Q70EK9 711 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 C3orf56Q8N813 242 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 OR10A6Q8NH74 314 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 STON2Q8WXE9 905 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 TAMM41Q96BW9 452 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 ZMYND19Q96E35 227 aaPredicted RBP13.14□□□□□ -0.31
SKA3-204ENST00000462482 SGTBQ96EQ0 304 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 ELMOD3Q96FG2 381 aa13.14□□□□□ -0.31
SKA3-204ENST00000462482 ATP6V1G3Q96LB4 118 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms