RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 ZNF837Q96EG3 531 aaPredicted RBP12.12□□□□□ -0.47
CHRD-209ENST00000461120 SLC29A1Q99808 456 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 TMUB1Q9BVT8 246 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 HDHD5Q9BXW7 423 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 CRLF2Q9HC73 371 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 NKX1-2Q9UD57 310 aaPredicted RBP12.12□□□□□ -0.47
CHRD-209ENST00000461120 GPR52Q9Y2T5 361 aa12.12□□□□□ -0.47
CHRD-209ENST00000461120 SLC22A23A1A5C7 686 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 FAM221AA4D161 298 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 PRSS37A4D1T9 235 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 AHCYL1O43865 530 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 QDPRP09417 244 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 NR2C1P13056 603 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 HIST1H1CP16403 213 aaKnown RBP12.11□□□□□ -0.47
CHRD-209ENST00000461120 IL32P24001 234 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 GRK5P34947 590 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 CDKN2AP42771 156 aaKnown RBP12.11□□□□□ -0.47
CHRD-209ENST00000461120 GIPRP48546 466 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 ZNF133P52736 654 aaPredicted RBP12.11□□□□□ -0.47
CHRD-209ENST00000461120 CDK5Q00535 292 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 MYBPC1Q00872 1141 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 FMODQ06828 376 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 STK11Q15831 433 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 THEM4Q5T1C6 240 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 SLC35F1Q5T1Q4 408 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 ACSM5Q6NUN0 579 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 SLC27A4Q6P1M0 643 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 BHLHA15Q7RTS1 189 aaPredicted RBP12.11□□□□□ -0.47
CHRD-209ENST00000461120 STEAP2Q8NFT2 490 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 OR4K13Q8NH42 304 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 FNDC8Q8TC99 324 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 RBP7Q96R05 134 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 RNPEPL1Q9HAU8 725 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 SLC25A19Q9HC21 320 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 VSX1Q9NZR4 365 aaPredicted RBP12.11□□□□□ -0.47
CHRD-209ENST00000461120 ENOPH1Q9UHY7 261 aa12.11□□□□□ -0.47
CHRD-209ENST00000461120 RRP15Q9Y3B9 282 aaKnown RBP12.11□□□□□ -0.47
CHRD-209ENST00000461120 IGKV1D-43A0A0B4J1Z2 117 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 CIB4A0PJX0 185 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 CASQ2O14958 399 aaPredicted RBP12.1□□□□□ -0.47
CHRD-209ENST00000461120 DHHO43323 396 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 MGRN1O60291 552 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 RAD51DO75771 328 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 SLC2A10O95528 541 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 IGFBP2P18065 325 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 CDH2P19022 906 aaPredicted RBP12.1□□□□□ -0.47
CHRD-209ENST00000461120 PEX2P28328 305 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 EPHA2P29317 976 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 SH3BGRP55822 239 aaPredicted RBP12.1□□□□□ -0.47
CHRD-209ENST00000461120 ARF1P84077 181 aaKnown RBP12.1□□□□□ -0.47
CHRD-209ENST00000461120 TGFBR3Q03167 851 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 SLC34A1Q06495 639 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHRD-209ENST00000461120 GABRA6Q16445 453 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 ZNF362Q5T0B9 420 aaPredicted RBP12.1□□□□□ -0.47
CHRD-209ENST00000461120 C10orf128Q5T292 105 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 TMEM236Q5W0B7 351 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 LPCAT4Q643R3 524 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 LEG1Q6P5S2 330 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 SLC25A47Q6Q0C1 308 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 JAZF1Q86VZ6 243 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 ACBD4Q8NC06 268 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 C1orf162Q8NEQ5 155 aaPredicted RBP12.1□□□□□ -0.47
CHRD-209ENST00000461120 SDR9C7Q8NEX9 313 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 OR52E2Q8NGJ4 325 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 OR1K1Q8NGR3 316 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 SNX18Q96RF0 628 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 NMNAT3Q96T66 252 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 MDFIQ99750 246 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 GABARAPL3Q9BY60 117 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 OR10A4Q9H209 315 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 KLHL21Q9UJP4 597 aa12.1□□□□□ -0.47
CHRD-209ENST00000461120 ZNF99A8MXY4 864 aaPredicted RBP12.09□□□□□ -0.47
CHRD-209ENST00000461120 POLR2IP36954 125 aaKnown RBP12.09□□□□□ -0.47
CHRD-209ENST00000461120 PEX19P40855 299 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 RAD23AP54725 363 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 NPRL3Q12980 569 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 RIPK1Q13546 671 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 SNTB1Q13884 538 aaKnown RBP12.09□□□□□ -0.47
CHRD-209ENST00000461120 PTGES3Q15185 160 aaKnown RBP12.09□□□□□ -0.47
CHRD-209ENST00000461120 LRRC36Q1X8D7 754 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 OGFRL1Q5TC84 451 aaPredicted RBP12.09□□□□□ -0.47
CHRD-209ENST00000461120 OR7E24Q6IFN5 339 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 DMRTC2Q8IXT2 367 aaPredicted RBP12.09□□□□□ -0.47
CHRD-209ENST00000461120 NPEPL1Q8NDH3 523 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 BCL2L2Q92843 193 aaPredicted RBP12.09□□□□□ -0.47
CHRD-209ENST00000461120 S100PBPQ96BU1 408 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 BOD1Q96IK1 185 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 MUS81Q96NY9 551 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 DDOQ99489 341 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 ACTR6Q9GZN1 396 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 SYT4Q9H2B2 425 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 RIBC2Q9H4K1 309 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 CMC2Q9NRP2 79 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 ORC6Q9Y5N6 252 aa12.09□□□□□ -0.47
CHRD-209ENST00000461120 NSD1Q96L73 2696 aaPredicted RBP12.08□□□□□ -0.48
CHRD-209ENST00000461120 OR6C68A6NDL8 312 aa12.08□□□□□ -0.48
CHRD-209ENST00000461120 RIIAD1A6NNX1 92 aa12.08□□□□□ -0.48
CHRD-209ENST00000461120 ZAR1LA6NP61 321 aa12.08□□□□□ -0.48
CHRD-209ENST00000461120 SEC14L2O76054 403 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms