RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SHISA9B4DS77 424 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 SLC17A2O00624 439 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 HSD17B6O14756 317 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 KDELR3O43731 214 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 MGRN1O60291 552 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 TOM1O60784 492 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 OR7A10O76100 309 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 OXSR1O95747 527 aaPredicted RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 APOA1P02647 267 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 UBCP0CG48 685 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 GATA1P15976 413 aaPredicted RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 IGHV1-2P23083 117 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 CASP1P29466 404 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 GCKP35557 465 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ELK3P41970 407 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 IFFO1Q0D2I5 559 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ITGB3BPQ13352 177 aaPredicted RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 XRCC4Q13426 336 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 DGUOKQ16854 277 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 EIPR1Q53HC9 387 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 CARD16Q5EG05 197 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 BEX5Q5H9J7 111 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 METTL11BQ5VVY1 283 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 AP1ARQ63HQ0 302 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ZNF613Q6PF04 617 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 PGAP1Q75T13 922 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 NUDCD3Q8IVD9 361 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 SYCE1Q8N0S2 351 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 IQCKQ8N0W5 287 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 FAM58AQ8N1B3 248 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ABHD12Q8N2K0 398 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 MREGQ8N565 214 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 OR5T3Q8NGG3 340 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 OR8K1Q8NGG5 319 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 PAQR8Q8TEZ7 354 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ITLN1Q8WWA0 313 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 HTR3CQ8WXA8 447 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 SH3GL3Q99963 347 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 REEP4Q9H6H4 257 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 HEXA-AS1Q9H8Q6 139 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 MIEF1Q9NQG6 463 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 BATF3Q9NR55 127 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 GPATCH2LQ9NWQ4 482 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 B3GNT2Q9NY97 397 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 DHRS4-AS1Q9P1J3 65 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 MYEF2Q9P2K5 600 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 SNX12Q9UMY4 172 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 NOSIPQ9Y314 301 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 N6AMT1Q9Y5N5 214 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 STYXL1Q9Y6J8 313 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 CASZ1Q86V15 1759 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 NID2Q14112 1375 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ATRNO75882 1429 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 BAZ2AQ9UIF9 1905 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 RREB1Q92766 1687 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 IGHV3OR16-10A0A075B7F0 116 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 NSG1A0A0A6YYJ2 146 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 SERPINE3A8MV23 424 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 B4DXG7 233 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 GFYI3L273 518 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 AIM2O14862 343 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 SIVA1O15304 175 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 TRAPPC3O43617 180 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 AIREO43918 545 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 HCN1O60741 890 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ATP6V1G2O95670 118 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 PIGRP01833 764 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 RPSAP08865 295 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 MYL2P10916 166 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ABOP16442 354 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 BCKDHBP21953 392 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ADORA2BP29275 332 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 NSG1P42857 185 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 SLC1A2P43004 574 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 GPR4P46093 362 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 RPL29P47914 159 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 ARRB1P49407 418 aaPredicted RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 CCNG1P51959 295 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 KPNA2P52292 529 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 EFNA3P52797 238 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 BIDP55957 195 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ELF3P78545 371 aaPredicted RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 MRPS25P82663 173 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 MRPS11P82912 194 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 RAD51Q06609 339 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 ELAVL2Q12926 359 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 HSDL1Q3SXM5 330 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 OR52E8Q6IFG1 317 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 REEP3Q6NUK4 255 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 C8orf74Q6P047 294 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 SLC25A48Q6ZT89 311 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 MS4A15Q8N5U1 240 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 FAM86B1Q8N7N1 296 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 CCDC26Q8TAB7 109 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 VN1R17PQ8TDU5 208 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 SETD7Q8WTS6 366 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 TFB1MQ8WVM0 346 aaKnown RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 CIDECQ96AQ7 238 aaPredicted RBP2.32□□□□□ -2.04
HPS3-203ENST00000460822 NRBF2Q96F24 287 aa2.32□□□□□ -2.04
HPS3-203ENST00000460822 PAGE5Q96GU1 130 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms