RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 C10orf128Q5T292 105 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 FAM205BPQ63HN1 556 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 CYP2R1Q6VVX0 501 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 ARHGAP24Q8N264 748 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 CIARTQ8N365 385 aaPredicted RBP12.36□□□□□ -0.43
THBS3-204ENST00000460050 NUP37Q8NFH4 326 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 IL17RDQ8NFM7 739 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 OR52J3Q8NH60 311 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 ZNF519Q8TB69 540 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 NMD3Q96D46 503 aaKnown RBP12.36□□□□□ -0.43
THBS3-204ENST00000460050 FBXO17Q96EF6 278 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 COX4I2Q96KJ9 171 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 TSPAN32Q96QS1 320 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 KCNK17Q96T54 332 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 BDH2Q9BUT1 245 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 ALG12Q9BV10 488 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 DENND2DQ9H6A0 471 aaPredicted RBP12.36□□□□□ -0.43
THBS3-204ENST00000460050 SMURF2Q9HAU4 748 aa12.36□□□□□ -0.43
THBS3-204ENST00000460050 BARX1Q9HBU1 254 aaPredicted RBP12.36□□□□□ -0.43
THBS3-204ENST00000460050 RTTNQ86VV8 2226 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 NSD1Q96L73 2696 aaPredicted RBP12.35□□□□□ -0.43
THBS3-204ENST00000460050 ZFHX3Q15911 3703 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 IGKV1D-43A0A0B4J1Z2 117 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 SH3PXD2BA1X283 911 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 A6NIZ1 184 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 PDE5AO76074 875 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 GADD45GO95257 159 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 NR2C1P13056 603 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 ZNF26P17031 533 aaPredicted RBP12.35□□□□□ -0.43
THBS3-204ENST00000460050 RPL4P36578 427 aaKnown RBP12.35□□□□□ -0.43
THBS3-204ENST00000460050 OMPP47874 163 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 SMIM11AP58511 58 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 RAP1BP61224 184 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 RAP1AP62834 184 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 ERVK-25P63136 954 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 SNTB2Q13425 540 aaKnown RBP12.35□□□□□ -0.43
THBS3-204ENST00000460050 RAB39AQ14964 217 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 ADIPOQQ15848 244 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 CLEC12BQ2HXU8 276 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 ZDHHC21Q8IVQ6 265 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 CLDN22Q8N7P3 220 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 BCAS4Q8TDM0 211 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 NSMAFQ92636 917 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 RSRC1Q96IZ7 334 aaKnown RBP12.35□□□□□ -0.43
THBS3-204ENST00000460050 SMR3AQ99954 134 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 FUZQ9BT04 418 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 NDEL1Q9GZM8 345 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 GSX1Q9H4S2 264 aaPredicted RBP12.35□□□□□ -0.43
THBS3-204ENST00000460050 IL1RAPQ9NPH3 570 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 KRCC1Q9NPI7 259 aaPredicted RBP12.35□□□□□ -0.43
THBS3-204ENST00000460050 FBXL3Q9UKT7 428 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 AURKCQ9UQB9 309 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 SIGLEC7Q9Y286 467 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 ADAM18Q9Y3Q7 739 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 UGT2A1Q9Y4X1 527 aa12.35□□□□□ -0.43
THBS3-204ENST00000460050 H7C417 338 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 SMAD7O15105 426 aaKnown RBP12.34□□□□□ -0.43
THBS3-204ENST00000460050 CD14P08571 375 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 OR4A8P0C604 315 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 BMP4P12644 408 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 RRM2P31350 389 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 CDAP32320 146 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 THBS4P35443 961 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 SERPINF1P36955 418 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 MRPS34P82930 218 aaKnown RBP12.34□□□□□ -0.43
THBS3-204ENST00000460050 DAG1Q14118 895 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 SWI5Q1ZZU3 235 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 MST1LQ2TV78 715 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 SLC36A2Q495M3 483 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 NRN1LQ496H8 165 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 MTX3Q5HYI7 312 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 THEM4Q5T1C6 240 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 KRT80Q6KB66 452 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 TMEM53Q6P2H8 277 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 SLC25A47Q6Q0C1 308 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 SLC16A14Q7RTX9 510 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 TRPM8Q7Z2W7 1104 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 DPPA2Q7Z7J5 298 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 BIVMQ86UB2 503 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 ZNF584Q8IVC4 421 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 ARIH2OSQ8N7S6 290 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 FNDC8Q8TC99 324 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 Q96M85 177 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 RBP7Q96R05 134 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 MUC13Q9H3R2 512 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 ZNF442Q9H7R0 627 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 RNF121Q9H920 327 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 PRPF19Q9UMS4 504 aaKnown RBP12.34□□□□□ -0.43
THBS3-204ENST00000460050 PMF1-BGLAPU3KQ54 211 aa12.34□□□□□ -0.43
THBS3-204ENST00000460050 TCRBV5S2A0A599 114 aa12.33□□□□□ -0.44
THBS3-204ENST00000460050 UNC119BA6NIH7 251 aa12.33□□□□□ -0.44
THBS3-204ENST00000460050 H7C1C5 153 aa12.33□□□□□ -0.44
THBS3-204ENST00000460050 PTP4A3O75365 173 aa12.33□□□□□ -0.44
THBS3-204ENST00000460050 NDUFB2O95178 105 aa12.33□□□□□ -0.44
THBS3-204ENST00000460050 SERPINA5P05154 406 aa12.33□□□□□ -0.44
THBS3-204ENST00000460050 ZNF35P13682 527 aa12.33□□□□□ -0.44
THBS3-204ENST00000460050 NUDT6P53370 316 aa12.33□□□□□ -0.44
THBS3-204ENST00000460050 SNRPD2P62316 118 aaKnown RBP12.33□□□□□ -0.44
THBS3-204ENST00000460050 LCN6P62502 163 aa12.33□□□□□ -0.44
THBS3-204ENST00000460050 TNK1Q13470 666 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms