RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 NANSQ9NR45 359 aa9.24□□□□□ -0.93
USP39-210ENST00000459775 C19orf12Q9NSK7 152 aa9.24□□□□□ -0.93
USP39-210ENST00000459775 SCOCQ9UIL1 159 aa9.24□□□□□ -0.93
USP39-210ENST00000459775 SIGLEC7Q9Y286 467 aa9.24□□□□□ -0.93
USP39-210ENST00000459775 ADAM18Q9Y3Q7 739 aa9.24□□□□□ -0.93
USP39-210ENST00000459775 ORC6Q9Y5N6 252 aa9.24□□□□□ -0.93
USP39-210ENST00000459775 TRAV36DV7A0A075B6V5 113 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 A0A0J9YW62 118 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 E9PI62 339 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 C11orf98E9PRG8 122 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 M0R082 166 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 TOR1AO14656 332 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 IMPA2O14732 288 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 TNFSF11O14788 317 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 OR7A10O76100 309 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 F13BP05160 661 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 GRPRP30550 384 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 IFNGR2P38484 337 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 DLX5P56178 289 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 GINS1Q14691 196 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 SMARCD3Q6STE5 483 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 CCDC103Q8IW40 242 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 WDFY1Q8IWB7 410 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 CDK20Q8IZL9 346 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 EXD3Q8N9H8 876 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 ZNF417Q8TAU3 575 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 AKAP1Q92667 903 aaKnown RBP eCLIP9.23□□□□□ -0.93
USP39-210ENST00000459775 HPS1Q92902 700 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 COX4I2Q96KJ9 171 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 ZNF587Q96SQ5 575 aaPredicted RBP9.23□□□□□ -0.93
USP39-210ENST00000459775 NEURL2Q9BR09 285 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 TSSK6Q9BXA6 273 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 A0A087WZY1 265 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 hCG_1809904A0A1W2PP81 198 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 A0A1W2PPE2 198 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 A0A1W2PR64 198 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 MCIDASD6RGH6 385 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 FTCDNL1E5RQL4 147 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 H0Y8G0 127 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 PYCARD-AS1I3L0S3 204 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 BCKDKO14874 412 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 HPNP05981 417 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 ASAH2BP0C7U1 165 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 HLA-DOBP13765 273 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 EIF1P41567 113 aaKnown RBP9.23□□□□□ -0.93
USP39-210ENST00000459775 EIF2B2P49770 351 aaKnown RBP9.23□□□□□ -0.93
USP39-210ENST00000459775 RIDAP52758 137 aaKnown RBP9.23□□□□□ -0.93
USP39-210ENST00000459775 GFRA1P56159 465 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 CTU2Q2VPK5 515 aaKnown RBP9.23□□□□□ -0.93
USP39-210ENST00000459775 Q6ZS92 163 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 RASSF6Q6ZTQ3 369 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 CHERPQ8IWX8 916 aaKnown RBP9.23□□□□□ -0.93
USP39-210ENST00000459775 ZNF679Q8IYX0 411 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 PARP8Q8N3A8 854 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 IL4I1Q96RQ9 567 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 PIGQQ9BRB3 760 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 OR2B2Q9GZK3 357 aa9.23□□□□□ -0.93
USP39-210ENST00000459775 MPDZO75970 2070 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 HMX3A6NHT5 357 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 LIPT2A6NK58 231 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 NPIPA5E9PKD4 350 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 F8W036 122 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 EIF1AYO14602 144 aaKnown RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 LDLRAD4O15165 306 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 AKR7A2O43488 359 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 AHSA1O95433 338 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 DIRAS3O95661 229 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 PPP1R3DO95685 299 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 ELK4P28324 431 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 GIPRP48546 466 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 HOXA1P49639 335 aaPredicted RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 OR2B6P58173 313 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 ERVK-25P63136 954 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 RPL18Q07020 188 aaKnown RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 SLC10A1Q14973 349 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 SMN1Q16637 294 aaKnown RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 ZBED5Q49AG3 693 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 PRR30Q53SZ7 412 aaPredicted RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 FOXB2Q5VYV0 432 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 TRAT1Q6PIZ9 186 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 CD300LDQ6UXZ3 194 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 GGNQ86UU5 652 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 SLC22A16Q86VW1 577 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 LINC00471Q8N535 108 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 TMEM99Q8N816 258 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 OR5T1Q8NG75 326 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 AKR7LQ8NHP1 331 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 CNIH3Q8TBE1 160 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 ZNF775Q96BV0 537 aaPredicted RBP9.22□□□□□ -0.93
USP39-210ENST00000459775 DDIT4LQ96D03 193 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 SRXN1Q9BYN0 137 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 OR51B6Q9H340 312 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 UFSP2Q9NUQ7 469 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 TBC1D23Q9NUY8 699 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 TAS2R5Q9NYW4 299 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 TVP23BQ9NYZ1 205 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 SPRR3Q9UBC9 169 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 B4GALT7Q9UBV7 327 aa9.22□□□□□ -0.93
USP39-210ENST00000459775 NDRG4Q9ULP0 352 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms