RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 TCRBV5S2A0A599 114 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 SH3PXD2BA1X283 911 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 KRT36O76013 467 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 SLC2A10O95528 541 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 RAB36O95755 333 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 RRM2P31350 389 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 PTDSS1P48651 473 aaKnown RBP18.01■□□□□ 0.47
VARS-218ENST00000459667 ZNF133P52736 654 aaPredicted RBP18.01■□□□□ 0.47
VARS-218ENST00000459667 FMODQ06828 376 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 C10orf128Q5T292 105 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 SKA3Q8IX90 412 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 ZNF519Q8TB69 540 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 HTRA1Q92743 480 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 RSRC1Q96IZ7 334 aaKnown RBP18.01■□□□□ 0.47
VARS-218ENST00000459667 ALG12Q9BV10 488 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 DENND2DQ9H6A0 471 aaPredicted RBP18.01■□□□□ 0.47
VARS-218ENST00000459667 SMURF2Q9HAU4 748 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 SIGLEC7Q9Y286 467 aa18.01■□□□□ 0.47
VARS-218ENST00000459667 TEP1Q99973 2627 aaKnown RBP18■□□□□ 0.47
VARS-218ENST00000459667 A6NIZ1 184 aa18■□□□□ 0.47
VARS-218ENST00000459667 AQP12BA6NM10 295 aa18■□□□□ 0.47
VARS-218ENST00000459667 CD14P08571 375 aa18■□□□□ 0.47
VARS-218ENST00000459667 ZNF26P17031 533 aaPredicted RBP18■□□□□ 0.47
VARS-218ENST00000459667 HOXB6P17509 224 aaKnown RBP18■□□□□ 0.47
VARS-218ENST00000459667 APOBEC3AP31941 199 aaPredicted RBP18■□□□□ 0.47
VARS-218ENST00000459667 IFNGR2P38484 337 aa18■□□□□ 0.47
VARS-218ENST00000459667 GIPRP48546 466 aa18■□□□□ 0.47
VARS-218ENST00000459667 RAP1BP61224 184 aa18■□□□□ 0.47
VARS-218ENST00000459667 RAB1AP62820 205 aa18■□□□□ 0.47
VARS-218ENST00000459667 RAP1AP62834 184 aa18■□□□□ 0.47
VARS-218ENST00000459667 ERVK-25P63136 954 aa18■□□□□ 0.47
VARS-218ENST00000459667 FLOT2Q14254 428 aa18■□□□□ 0.47
VARS-218ENST00000459667 NRN1LQ496H8 165 aa18■□□□□ 0.47
VARS-218ENST00000459667 C11orf71Q6IPW1 123 aa18■□□□□ 0.47
VARS-218ENST00000459667 AQP12AQ8IXF9 295 aa18■□□□□ 0.47
VARS-218ENST00000459667 FNDC8Q8TC99 324 aa18■□□□□ 0.47
VARS-218ENST00000459667 NMD3Q96D46 503 aaKnown RBP18■□□□□ 0.47
VARS-218ENST00000459667 Q96MF0 132 aa18■□□□□ 0.47
VARS-218ENST00000459667 ZNF75AQ96N20 296 aa18■□□□□ 0.47
VARS-218ENST00000459667 SH3GL3Q99963 347 aa18■□□□□ 0.47
VARS-218ENST00000459667 GRHPRQ9UBQ7 328 aa18■□□□□ 0.47
VARS-218ENST00000459667 ADAM18Q9Y3Q7 739 aa18■□□□□ 0.47
VARS-218ENST00000459667 MAP1AP78559 2803 aaPredicted RBP17.99■□□□□ 0.47
VARS-218ENST00000459667 IGKV1D-43A0A0B4J1Z2 117 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 IGHV2OR16-5A0A0B4J2B6 119 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 UNC119BA6NIH7 251 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 ACOT8O14734 319 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 GSC2O15499 205 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 OR10H3O60404 316 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 NDUFB2O95178 105 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 PATE4P0C8F1 98 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 ZNF14P17017 642 aaPredicted RBP17.99■□□□□ 0.47
VARS-218ENST00000459667 MAGEA2P43356 314 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 PGM2L1Q6PCE3 622 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 CLDN22Q8N7P3 220 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 ARIH2OSQ8N7S6 290 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 IL17RDQ8NFM7 739 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 OR4F15Q8NGB8 312 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 FGFBP3Q8TAT2 258 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 NSMAFQ92636 917 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 MS4A3Q96HJ5 214 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 RBP7Q96R05 134 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 CACNG6Q9BXT2 260 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 CA10Q9NS85 328 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 FBXL3Q9UKT7 428 aa17.99■□□□□ 0.47
VARS-218ENST00000459667 PTP4A3O75365 173 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 RAP2AP10114 183 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 THEM4Q5T1C6 240 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 SLC25A47Q6Q0C1 308 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 VHLLQ6RSH7 139 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 SLC16A14Q7RTX9 510 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 DPPA2Q7Z7J5 298 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 NUP37Q8NFH4 326 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 Q96M85 177 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 ZNF570Q96NI8 536 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 GPA33Q99795 319 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 MMADHCQ9H3L0 296 aaPredicted RBP17.98■□□□□ 0.47
VARS-218ENST00000459667 DLL4Q9NR61 685 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 UGT2A1Q9Y4X1 527 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 VPS13CQ709C8 3753 aa17.98■□□□□ 0.47
VARS-218ENST00000459667 H7C1C5 153 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 CDAP32320 146 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 LCN6P62502 163 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 MRPS34P82930 218 aaKnown RBP17.97■□□□□ 0.47
VARS-218ENST00000459667 HGFACQ04756 655 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 RAB39AQ14964 217 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 SLC36A2Q495M3 483 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 TMEM53Q6P2H8 277 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 FAM122BQ7Z309 247 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 ZER1Q7Z7L7 766 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 SPATA24Q86W54 205 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 LINC00471Q8N535 108 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 FBXO17Q96EF6 278 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 GPX7Q96SL4 187 aaPredicted RBP17.97■□□□□ 0.47
VARS-218ENST00000459667 CADM1Q9BY67 442 aaKnown RBP17.97■□□□□ 0.47
VARS-218ENST00000459667 RNF121Q9H920 327 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 SIAEQ9HAT2 523 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 NRIP3Q9NQ35 241 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 IL20RAQ9UHF4 553 aa17.97■□□□□ 0.47
VARS-218ENST00000459667 LYVE1Q9Y5Y7 322 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms