RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 C18orf12Q96KH6 178 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 ZNF570Q96NI8 536 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 RBP7Q96R05 134 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 SMR3AQ99954 134 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 THTPAQ9BU02 230 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 MRPL13Q9BYD1 178 aaKnown RBP16.21■□□□□ 0.19
USP39-209ENST00000458268 OR51B6Q9H340 312 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 DENND2DQ9H6A0 471 aaPredicted RBP16.21■□□□□ 0.19
USP39-209ENST00000458268 B3GNT2Q9NY97 397 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 ZNF224Q9NZL3 707 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 ACTR3BQ9P1U1 418 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 GRHPRQ9UBQ7 328 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 TMCC3Q9ULS5 477 aa16.21■□□□□ 0.19
USP39-209ENST00000458268 IGKV1D-43A0A0B4J1Z2 117 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 XKRYO14609 159 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 ENTPD5O75356 428 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 SEMG1P04279 462 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 OR4A8P0C604 315 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 TSPAN19P0C672 248 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 NR2C1P13056 603 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 GALK2Q01415 458 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 DAG1Q14118 895 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 RAB35Q15286 201 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 TAF11Q15544 211 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 SPATS1Q496A3 300 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 C11orf71Q6IPW1 123 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 LRRC75AQ8NAA5 344 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 OR4F15Q8NGB8 312 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 LRGUKQ96M69 825 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 Q96M85 177 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 FOXN4Q96NZ1 517 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 KCNK17Q96T54 332 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 VRK1Q99986 396 aaPredicted RBP16.2■□□□□ 0.18
USP39-209ENST00000458268 BDH2Q9BUT1 245 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 KCNN2Q9H2S1 579 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 PMF1-BGLAPU3KQ54 211 aa16.2■□□□□ 0.18
USP39-209ENST00000458268 SH3PXD2BA1X283 911 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 A6NIZ1 184 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 NDUFB2O95178 105 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 INHBBP09529 407 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 BMP4P12644 408 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 CCL2P13500 99 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 THBS4P35443 961 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 OMPP47874 163 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 RAP1BP61224 184 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 SNRPD2P62316 118 aaKnown RBP16.19■□□□□ 0.18
USP39-209ENST00000458268 RAP1AP62834 184 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 HSF2Q03933 536 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 HGFACQ04756 655 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 PPP1R8Q12972 351 aaKnown RBP16.19■□□□□ 0.18
USP39-209ENST00000458268 C3orf36Q3SXR2 165 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 ANKDD1AQ495B1 522 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 SLC36A2Q495M3 483 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 PRSS57Q6UWY2 283 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 ZNF627Q7L945 461 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 FAM169BQ8N8A8 192 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 ICA1LQ8NDH6 482 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 FANK1Q8TC84 345 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 RASD2Q96D21 266 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 CCNB1IP1Q9NPC3 277 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 TAS2R1Q9NYW7 299 aa16.19■□□□□ 0.18
USP39-209ENST00000458268 TEX13CA0A0J9YWL9 993 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 NPIPB13A6NJU9 1138 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 CENPBD1B2RD01 187 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 NPIPB4C9JG80 1138 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 SOCS2O14508 198 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 IGHMP01871 453 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 CD14P08571 375 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 ZNF14P17017 642 aaPredicted RBP16.18■□□□□ 0.18
USP39-209ENST00000458268 ZNF26P17031 533 aaPredicted RBP16.18■□□□□ 0.18
USP39-209ENST00000458268 SERPINF1P36955 418 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 GUCA1AP43080 201 aaPredicted RBP16.18■□□□□ 0.18
USP39-209ENST00000458268 MS4A2Q01362 244 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 KRR1Q13601 381 aaKnown RBP16.18■□□□□ 0.18
USP39-209ENST00000458268 FHL1Q13642 323 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 CARTPTQ16568 116 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 HIST3H3Q16695 136 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 IQCCQ4KMZ1 466 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 FAM205BPQ63HN1 556 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 ARHGAP24Q8N264 748 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 SVOPLQ8N434 492 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 ARIH2OSQ8N7S6 290 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 MAPK1IP1LQ8NDC0 245 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 ZNF519Q8TB69 540 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 ALG12Q9BV10 488 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 CDH20Q9HBT6 801 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 BARX1Q9HBU1 254 aaPredicted RBP16.18■□□□□ 0.18
USP39-209ENST00000458268 PRPF19Q9UMS4 504 aaKnown RBP16.18■□□□□ 0.18
USP39-209ENST00000458268 SIGLEC7Q9Y286 467 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 IER3IP1Q9Y5U9 82 aa16.18■□□□□ 0.18
USP39-209ENST00000458268 IQCMA0A1B0GVH7 501 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 VSTM5A8MXK1 200 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 GYG2O15488 501 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 GPRIN2O60269 458 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 LY6HO94772 140 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 PPP1R3DO95685 299 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 FAM157BP0CG42 384 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 PAX1P15863 534 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 NPR2P20594 1047 aa16.17■□□□□ 0.18
USP39-209ENST00000458268 CCNOP22674 350 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms