RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TSSK2Q96PF2 358 aa18.08■□□□□ 0.48
SNX27-204ENST00000458013 WASH6PQ9NQA3 447 aa18.08■□□□□ 0.48
SNX27-204ENST00000458013 LOXHD1Q8IVV2 1947 aa18.08■□□□□ 0.48
SNX27-204ENST00000458013 CYB5BO43169 146 aa18.08■□□□□ 0.48
SNX27-204ENST00000458013 SDHBP21912 280 aa18.08■□□□□ 0.48
SNX27-204ENST00000458013 HTR1FP30939 366 aa18.08■□□□□ 0.48
SNX27-204ENST00000458013 FAM199XQ6PEV8 388 aaPredicted RBP18.08■□□□□ 0.48
SNX27-204ENST00000458013 PAPD4Q6PIY7 484 aaKnown RBP18.08■□□□□ 0.48
SNX27-204ENST00000458013 PATE1Q8WXA2 126 aa18.08■□□□□ 0.48
SNX27-204ENST00000458013 FAM173AQ9BQD7 235 aa18.08■□□□□ 0.48
SNX27-204ENST00000458013 SLC5A10A0PJK1 596 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 BLACEA4D250 179 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 SIRPB1O00241 398 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 RAB11AP62491 216 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 RBPJQ06330 500 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 ZNF687Q8N1G0 1237 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 MS4A8Q9BY19 250 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 C5P01031 1676 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 AQP7P3A6NL99 342 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 PSMB1P20618 241 aaKnown RBP18.07■□□□□ 0.48
SNX27-204ENST00000458013 RAP2BP61225 183 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 NXNL2Q5VZ03 156 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 TCN2P20062 427 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 PAX6P26367 422 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 HAGHQ16775 308 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 GAB3Q8WWW8 586 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 UBL7Q96S82 380 aaPredicted RBP18.07■□□□□ 0.48
SNX27-204ENST00000458013 CDCA3Q99618 268 aaPredicted RBP18.07■□□□□ 0.48
SNX27-204ENST00000458013 PIGQQ9BRB3 760 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 EXOSC3Q9NQT5 275 aaKnown RBP18.07■□□□□ 0.48
SNX27-204ENST00000458013 ACSS1Q9NUB1 689 aaPredicted RBP18.07■□□□□ 0.48
SNX27-204ENST00000458013 CLCF1Q9UBD9 225 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 A0A087WV62 115 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 LOC100289279A0A1B0GTE1 492 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 MBLAC1A4D2B0 266 aaPredicted RBP18.07■□□□□ 0.48
SNX27-204ENST00000458013 PCSK6P29122 969 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 ANKRD16Q6P6B7 361 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 SLC16A11Q8NCK7 471 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 USP3Q9Y6I4 520 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 ATP6V1G2-DDX39BF2Z307 99 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 SOX15O60248 233 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 F2RP25116 425 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 TMEM99Q8N816 258 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 ZFP62Q8NB50 900 aaPredicted RBP18.07■□□□□ 0.48
SNX27-204ENST00000458013 SFT2D1Q8WV19 159 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 CSNK1G1Q9HCP0 422 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 A4GALTQ9NPC4 353 aa18.07■□□□□ 0.48
SNX27-204ENST00000458013 GPR55Q9Y2T6 319 aaPredicted RBP18.07■□□□□ 0.48
SNX27-204ENST00000458013 ZNF814B7Z6K7 855 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 LRRC26Q2I0M4 334 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 TMEM207Q6UWW9 146 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 Q6ZSR9 355 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 SLC22A24Q8N4F4 322 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 HLA-CQ95604 372 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 CTRB1P17538 263 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 TRHRP34981 398 aaPredicted RBP18.06■□□□□ 0.48
SNX27-204ENST00000458013 CTRB2Q6GPI1 263 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 GOT1L1Q8NHS2 421 aaPredicted RBP18.06■□□□□ 0.48
SNX27-204ENST00000458013 C8orf44Q96CB5 159 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 TAF9BQ9HBM6 251 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 HEYLQ9NQ87 328 aaPredicted RBP18.06■□□□□ 0.48
SNX27-204ENST00000458013 PPT2Q9UMR5 302 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 MTHFD2P13995 350 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 TBC1D28Q2M2D7 210 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 ZNF701M0R085 212 aaPredicted RBP18.06■□□□□ 0.48
SNX27-204ENST00000458013 NAGAP17050 411 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 PINX1Q96BK5 328 aaKnown RBP18.06■□□□□ 0.48
SNX27-204ENST00000458013 HRH3Q9Y5N1 445 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 RPS19P39019 145 aaKnown RBP18.06■□□□□ 0.48
SNX27-204ENST00000458013 THBS3P49746 956 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 DUSP2Q05923 314 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 MDGA2Q7Z553 956 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 OR51E1Q8TCB6 317 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 RAB39BQ96DA2 213 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 C14orf79Q96F83 325 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 SYT11Q9BT88 431 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 SEMA6CQ9H3T2 930 aa18.06■□□□□ 0.48
SNX27-204ENST00000458013 OR10A3P58181 314 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 OR2G3Q8NGZ4 309 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 Q96M85 177 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 SEMA4CQ9C0C4 833 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 RPS27P42677 84 aaKnown RBP18.05■□□□□ 0.48
SNX27-204ENST00000458013 TEKQ02763 1124 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 PKDCCQ504Y2 493 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 GAREM2Q75VX8 874 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 RNF113BQ8IZP6 322 aaKnown RBP18.05■□□□□ 0.48
SNX27-204ENST00000458013 NKX6-3A6NJ46 265 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 LGI1O95970 557 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 MMP12P39900 470 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 MNX1P50219 401 aaPredicted RBP18.05■□□□□ 0.48
SNX27-204ENST00000458013 PARM1Q6UWI2 310 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 CATSPERDQ86XM0 798 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 ORAI1Q96D31 301 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 QPCTLQ9NXS2 382 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 A8MVM7 634 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 SSSCA1O60232 199 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 TPOP07202 933 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 IAPPP10997 89 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 MTNR1BP49286 362 aa18.05■□□□□ 0.48
SNX27-204ENST00000458013 FAM122CQ6P4D5 195 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms