RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 OR5V1Q9UGF6 321 aa15.01□□□□□ -0.01
CCDC43-202ENST00000457422 COLQQ9Y215 455 aaPredicted RBP15.01□□□□□ -0.01
CCDC43-202ENST00000457422 CENPBD1B2RD01 187 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 ZNF208O43345 1280 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 SULT1B1O43704 296 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 DHFRP00374 187 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 CFPP27918 469 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 HOXD12P35452 270 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 MNDAP41218 407 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 NDUFA5Q16718 116 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 WDR38Q5JTN6 314 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 SLC22A10Q63ZE4 541 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 LCN10Q6JVE6 187 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 TMEM205Q6UW68 189 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 CPEB2Q7Z5Q1 589 aaKnown RBP15□□□□□ -0.01
CCDC43-202ENST00000457422 EID2Q8N6I1 236 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 ZNF248Q8NDW4 579 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 MCHR2Q969V1 340 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 SCMH1Q96GD3 660 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 GFM1Q96RP9 751 aaKnown RBP15□□□□□ -0.01
CCDC43-202ENST00000457422 ELOVL3Q9HB03 270 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 APMAPQ9HDC9 416 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 MCUBQ9NWR8 336 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 ING3Q9NXR8 418 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 MED11Q9P086 117 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 AKAP7Q9P0M2 348 aaPredicted RBP15□□□□□ -0.01
CCDC43-202ENST00000457422 HRH3Q9Y5N1 445 aa15□□□□□ -0.01
CCDC43-202ENST00000457422 TRABD2BA6NFA1 517 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 A6NIZ1 184 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 MS4A18H0YCH9 400 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 YKT6O15498 198 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 TPPPO94811 219 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 TCRBP04435 133 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 MAP2K6P52564 334 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 RAG2P55895 527 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 CLDN12P56749 244 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 RAP1BP61224 184 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 RAP1AP62834 184 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 ETFDHQ16134 617 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 MS4A18Q3C1V0 323 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 TMEM53Q6P2H8 277 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 SLC35D2Q76EJ3 337 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 WDR5BQ86VZ2 330 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 PPP1R3BQ86XI6 285 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 DND1Q8IYX4 353 aaKnown RBP14.99□□□□□ -0.01
CCDC43-202ENST00000457422 OR10AC1Q8NH08 325 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 PIGKQ92643 395 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 TMEM106AQ96A25 262 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 HAVCR1Q96D42 359 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 NIPAL2Q9H841 368 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 NUDT15Q9NV35 164 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 IGLV3-32A0A0A0MS00 114 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 GABARAPH6UMI1 98 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 C1QBP02746 253 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 SPARCP09486 303 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 HLA-DOBP13765 273 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 MSX1P28360 303 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 ERP29P30040 261 aaKnown RBP14.99□□□□□ -0.01
CCDC43-202ENST00000457422 GDNFP39905 211 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 GLO1Q04760 184 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 ODF4Q2M2E3 257 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 KCTD18Q6PI47 426 aaPredicted RBP14.99□□□□□ -0.01
CCDC43-202ENST00000457422 ARSKQ6UWY0 536 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 PRSS45Q7RTY3 260 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 KDM8Q8N371 416 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 ZNF454Q8N9F8 522 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 OR51A4Q8NGJ6 313 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 MIB2Q96AX9 1013 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 S100A16Q96FQ6 103 aaKnown RBP14.99□□□□□ -0.01
CCDC43-202ENST00000457422 CRB3Q9BUF7 120 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 AUNIPQ9H7T9 357 aa14.99□□□□□ -0.01
CCDC43-202ENST00000457422 TRAV8-7A0A075B6U6 113 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 A0A0A6YYJ9 748 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 H3BSH0 61 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 ZFAND5O76080 213 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 RCVRNP35243 200 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 GZMKP49863 264 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 ADAM8P78325 824 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 MRPS10P82664 201 aaKnown RBP14.98□□□□□ -0.01
CCDC43-202ENST00000457422 FOXF1Q12946 379 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 SLC25A53Q5H9E4 307 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 BCL2L15Q5TBC7 163 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 STPG1Q5TH74 334 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 MTFR2Q6P444 385 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 LYPD8Q6UX82 237 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 H1FNTQ75WM6 255 aaPredicted RBP14.98□□□□□ -0.01
CCDC43-202ENST00000457422 SYNPRQ8TBG9 265 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 ASB10Q8WXI3 467 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 DDIT4LQ96D03 193 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 ARL5BQ96KC2 179 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 ULBP3Q9BZM4 244 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 GHITMQ9H3K2 345 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 FANCFQ9NPI8 374 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 PAQR5Q9NXK6 330 aaPredicted RBP14.98□□□□□ -0.01
CCDC43-202ENST00000457422 C19orf25Q9UFG5 118 aaPredicted RBP14.98□□□□□ -0.01
CCDC43-202ENST00000457422 FOXJ3Q9UPW0 622 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 VDAC3Q9Y277 283 aa14.98□□□□□ -0.01
CCDC43-202ENST00000457422 ANXA2P2A6NMY6 339 aa14.97□□□□□ -0.01
CCDC43-202ENST00000457422 ANXA2P07355 339 aaKnown RBP14.97□□□□□ -0.01
CCDC43-202ENST00000457422 TDGF1P13385 188 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms