RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CCR9P51686 369 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 C1orf140Q5VVS0 124 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 SERPINA12Q8IW75 414 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 OR52I2Q8NH67 350 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 SYNPRQ8TBG9 265 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 METTL21AQ8WXB1 218 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 S100A16Q96FQ6 103 aaKnown RBP16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 CCDC120Q96HB5 630 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 DCBLD2Q96PD2 775 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 DPCDQ9BVM2 203 aaPredicted RBP16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 TXNIPQ9H3M7 391 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 HEXA-AS1Q9H8Q6 139 aa16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 VSX1Q9NZR4 365 aaPredicted RBP16.58■□□□□ 0.24
SEMA3B-209ENST00000456560 I3L521 148 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 BCAT2O15382 392 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 MNDAP41218 407 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 INSM1Q01101 510 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 LRRC69Q6ZNQ3 347 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 GRINAQ7Z429 371 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 SPEM1Q8N4L4 309 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 EID2Q8N6I1 236 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 MIB2Q96AX9 1013 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 HAVCR1Q96D42 359 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 C4orf45Q96LM5 186 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 OR8B4Q96RC9 309 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 NUDT22Q9BRQ3 303 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 COMMD4Q9H0A8 199 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 ZNF768Q9H5H4 540 aaKnown RBP16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 HRASLSQ9HDD0 168 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 TAS2R10Q9NYW0 307 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 AKAP7Q9P0M2 348 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 NUP50Q9UKX7 468 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 ETV7Q9Y603 341 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 TRAV8-7A0A075B6U6 113 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 IGLV1-36A0A0B4J1U3 117 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 ZNF593O00488 134 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 SCO1O75880 301 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 PLGP00747 810 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 IGHMP01871 453 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 AFF3P51826 1226 aaKnown RBP16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 RASGEF1BQ0VAM2 473 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 ZNF676Q8N7Q3 588 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 OR56B4Q8NH76 319 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 ZNF417Q8TAU3 575 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 STK35Q8TDR2 534 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 GPR148Q8TDV2 347 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 DUSP19Q8WTR2 217 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 GCDHQ92947 438 aaPredicted RBP16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 SORCS2Q96PQ0 1159 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 ACTR6Q9GZN1 396 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 TGIF2Q9GZN2 237 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 KLHL9Q9P2J3 617 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 UNC13CQ8NB66 2214 aa16.57■□□□□ 0.24
SEMA3B-209ENST00000456560 PLPP3O14495 311 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 KRT33AO76009 404 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 ECDO95905 644 aaPredicted RBP16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 PRKACBP22694 351 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 ART1P52961 327 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 RPS15P62841 145 aaKnown RBP16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 RNF4P78317 190 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 SLC17A1Q14916 467 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 LRRN1Q6UXK5 716 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 SHISA6Q6ZSJ9 500 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 KANSL1Q7Z3B3 1105 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 CPAMD8Q8IZJ3 1885 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 DNAAF1Q8NEP3 725 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 MCHR2Q969V1 340 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 CLEC4MQ9H2X3 399 aaPredicted RBP16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 ELOVL3Q9HB03 270 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 MRPL22Q9NWU5 206 aaKnown RBP16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 MRPL15Q9P015 296 aaKnown RBP16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 RCE1Q9Y256 329 aa16.56■□□□□ 0.24
SEMA3B-209ENST00000456560 GMDSO60547 372 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 ENPP1P22413 925 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 ZNF81P51508 661 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 FOXL2P58012 376 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 SNTA1Q13424 505 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 SHBQ15464 509 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 ST3GAL2Q16842 350 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 TMEM255AQ5JRV8 349 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 WDR38Q5JTN6 314 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 GLRX5Q86SX6 157 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 COMMD7Q86VX2 200 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 OR51A4Q8NGJ6 313 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 FCAMRQ8WWV6 532 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 ASB17Q8WXJ9 295 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 IGHV3-20A0A0C4DH32 117 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 NAP1L6A6NFF2 107 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 GPR171O14626 319 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 TPPPO94811 219 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 IFNA7P01567 189 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 CDK2P24941 298 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 SSTR2P30874 369 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 CENPAP49450 140 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 MRPS10P82664 201 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 CDH24Q86UP0 819 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 BEST4Q8NFU0 473 aa16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 PCNPQ8WW12 178 aaKnown RBP16.55■□□□□ 0.24
SEMA3B-209ENST00000456560 ATOH1Q92858 354 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms