RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 COX5AP20674 150 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 AGAP20933 346 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 GNLYP22749 145 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 HTR1FP30939 366 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 SH3BGRP55822 239 aaPredicted RBP9.92□□□□□ -0.82
TRAF4-206ENST00000454852 LCN6P62502 163 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 LGALS3BPQ08380 585 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 MED21Q13503 144 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 GGTLC2Q14390 218 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 P2RY6Q15077 328 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 IGFBP7Q16270 282 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 KCNMB1Q16558 191 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 C1QTNF12Q5T7M4 302 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 LAIR2Q6ISS4 152 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 MEPCEQ7L2J0 689 aaKnown RBP9.92□□□□□ -0.82
TRAF4-206ENST00000454852 LINGO2Q7L985 606 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 MRGPRGQ86SM5 289 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 GABRG1Q8N1C3 465 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 CNEP1R1Q8N9A8 125 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 SYT14Q8NB59 555 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 ASB5Q8WWX0 329 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 KISS1RQ969F8 398 aaPredicted RBP9.92□□□□□ -0.82
TRAF4-206ENST00000454852 ZNF582Q96NG8 517 aaPredicted RBP9.92□□□□□ -0.82
TRAF4-206ENST00000454852 ULBP2Q9BZM5 246 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 GPR35Q9HC97 309 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 RPRD1BQ9NQG5 326 aaKnown RBP9.92□□□□□ -0.82
TRAF4-206ENST00000454852 RASSF1Q9NS23 344 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 WARS2Q9UGM6 360 aaKnown RBP9.92□□□□□ -0.82
TRAF4-206ENST00000454852 LRCH1Q9Y2L9 728 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 UGT2A1Q9Y4X1 527 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 CHD6Q8TD26 2715 aa9.92□□□□□ -0.82
TRAF4-206ENST00000454852 RP1L1Q8IWN7 2480 aaPredicted RBP9.92□□□□□ -0.82
TRAF4-206ENST00000454852 CCDC182A6NF36 153 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 FAM183AA6NL82 134 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 A8MXE2 369 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 ZNF587BE7ETH6 402 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 SLC16A7O60669 478 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 ENTPD6O75354 484 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 CCDC159P0C7I6 412 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 GAAP10253 952 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 MPGP29372 298 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 CHRNB4P30926 498 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 SLC15A1P46059 708 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 UQCRFS1P47985 274 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 SIRPAP78324 504 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 MRPS34P82930 218 aaKnown RBP9.91□□□□□ -0.82
TRAF4-206ENST00000454852 ADORA2A-AS1P86434 159 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 GLO1Q04760 184 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 FMODQ06828 376 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 PCK2Q16822 640 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 SLC25A35Q3KQZ1 300 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 FBXL19-AS1Q494R0 122 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 C6orf141Q5SZD1 244 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 LCN1P1Q5VSP4 162 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 CARD17Q5XLA6 110 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 BEND4Q6ZU67 534 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 GLB1L2Q8IW92 636 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 C1orf162Q8NEQ5 155 aaPredicted RBP9.91□□□□□ -0.82
TRAF4-206ENST00000454852 BBS1Q8NFJ9 593 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 CCDC120Q96HB5 630 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 TSSK2Q96PF2 358 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 ALKBH3Q96Q83 286 aaPredicted RBP9.91□□□□□ -0.82
TRAF4-206ENST00000454852 TEAD3Q99594 435 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 WACQ9BTA9 647 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 C12orf49Q9H741 205 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 CRLF2Q9HC73 371 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 CLN6Q9NWW5 311 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 UBAP1Q9NZ09 502 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 H2AFY2Q9P0M6 372 aaPredicted RBP9.91□□□□□ -0.82
TRAF4-206ENST00000454852 UPB1Q9UBR1 384 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 PRSS50Q9UI38 385 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 SH3BGRL2Q9UJC5 107 aa9.91□□□□□ -0.82
TRAF4-206ENST00000454852 INTS1Q8N201 2190 aaKnown RBP9.91□□□□□ -0.82
TRAF4-206ENST00000454852 ZNF99A8MXY4 864 aaPredicted RBP9.9□□□□□ -0.82
TRAF4-206ENST00000454852 LRRTM2O43300 516 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 ITGA5P08648 1049 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 CLUP10909 449 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 PIPP12273 146 aaPredicted RBP9.9□□□□□ -0.82
TRAF4-206ENST00000454852 NPR2P20594 1047 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 LAP3P28838 519 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 ZNF84P51523 738 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 CDH11P55287 796 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 ROR2Q01974 943 aaKnown RBP9.9□□□□□ -0.82
TRAF4-206ENST00000454852 HSF2Q03933 536 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 POU4F2Q12837 409 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 ESPL1Q14674 2120 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 ETFDHQ16134 617 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 CEACAM16Q2WEN9 425 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 TEX30Q5JUR7 227 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 FAM27BQ5VT28 67 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 KRT80Q6KB66 452 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 ZNF474Q6S9Z5 364 aaPredicted RBP9.9□□□□□ -0.82
TRAF4-206ENST00000454852 FJX1Q86VR8 437 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 ZNF610Q8N9Z0 462 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 RELL2Q8NC24 303 aaPredicted RBP9.9□□□□□ -0.82
TRAF4-206ENST00000454852 PROKR2Q8NFJ6 384 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 SLC26A10Q8NG04 563 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 OR9Q1Q8NGQ5 310 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 LILRB4Q8NHJ6 448 aa9.9□□□□□ -0.82
TRAF4-206ENST00000454852 CNIH3Q8TBE1 160 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms