RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 SORCS2Q96PQ0 1159 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 TNFRSF13CQ96RJ3 184 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 CCT8L2Q96SF2 557 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 CDRT15Q96T59 188 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 SH3GL3Q99963 347 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 FUZQ9BT04 418 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 SMURF2Q9HAU4 748 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 ZNF346Q9UL40 294 aaKnown RBP12.59□□□□□ -0.39
HSPG2-207ENST00000453796 UGT2A1Q9Y4X1 527 aa12.59□□□□□ -0.39
HSPG2-207ENST00000453796 ANK3Q12955 4377 aaKnown RBP12.58□□□□□ -0.39
HSPG2-207ENST00000453796 IGHV4-30-2A0A087WSY4 118 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 EFCAB9A8MZ26 197 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 ENTPD5O75356 428 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 SLC2A10O95528 541 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 RAB36O95755 333 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 SERPINA5P05154 406 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 H1F0P07305 194 aaKnown RBP12.58□□□□□ -0.4
HSPG2-207ENST00000453796 BMP4P12644 408 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 MSX2P35548 267 aaPredicted RBP12.58□□□□□ -0.4
HSPG2-207ENST00000453796 GPR4P46093 362 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 LIMS1P48059 325 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 EFNA4P52798 201 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 FMODQ06828 376 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 SNTB2Q13425 540 aaKnown RBP12.58□□□□□ -0.4
HSPG2-207ENST00000453796 DAG1Q14118 895 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 RAB39AQ14964 217 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 KRT72Q14CN4 511 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 MSMPQ1L6U9 139 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 SAMD4BQ5PRF9 694 aaKnown RBP12.58□□□□□ -0.4
HSPG2-207ENST00000453796 KRT80Q6KB66 452 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 PODNL1Q6PEZ8 512 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 SLC25A47Q6Q0C1 308 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 IGFN1Q86VF2 1251 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 ZNF525Q8N782 197 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 MAPK1IP1LQ8NDC0 245 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 OR13C2Q8NGS9 318 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 OR51A7Q8NH64 312 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 NABP1Q96AH0 204 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 TSPAN32Q96QS1 320 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 ALG12Q9BV10 488 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 MAGEL2Q9UJ55 1249 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 FBXL3Q9UKT7 428 aa12.58□□□□□ -0.4
HSPG2-207ENST00000453796 hCG_2039718K7EN88 272 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 ARPC2O15144 300 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 MGRN1O60291 552 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 LY6HO94772 140 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 DIRAS1O95057 198 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 FARS2O95363 451 aaKnown RBP12.57□□□□□ -0.4
HSPG2-207ENST00000453796 FAM107AO95990 144 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 F12P00748 615 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-207ENST00000453796 IGFBP1P08833 259 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-207ENST00000453796 MMP7P09237 267 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-207ENST00000453796 NPR2P20594 1047 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 OMPP47874 163 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 PPOXP50336 477 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 ZNF84P51523 738 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 DSCR9P59020 149 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 SNRPD2P62316 118 aaKnown RBP12.57□□□□□ -0.4
HSPG2-207ENST00000453796 MRPS34P82930 218 aaKnown RBP12.57□□□□□ -0.4
HSPG2-207ENST00000453796 TOP3AQ13472 1001 aaPredicted RBP12.57□□□□□ -0.4
HSPG2-207ENST00000453796 SEC23BQ15437 767 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 SPATS1Q496A3 300 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 ZBED5Q49AG3 693 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 C16orf89Q6UX73 402 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 DPPA2Q7Z7J5 298 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 CDK20Q8IZL9 346 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 DEFB107AQ8IZN7 70 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 CLDN22Q8N7P3 220 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 PYURFQ96I23 114 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 DOK1Q99704 481 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 FAM53CQ9NYF3 392 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 TMEM5Q9Y2B1 443 aa12.57□□□□□ -0.4
HSPG2-207ENST00000453796 TRBV4-1A0A0J9YWV2 114 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 GPRIN2O60269 458 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 PTP4A3O75365 173 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 GMNNO75496 209 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 CDAP32320 146 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 FXYD6P3P58550 94 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 CD47Q08722 323 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 KRTAP21-3Q3LHN1 58 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 FAM205BPQ63HN1 556 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 CLEC2AQ6UVW9 174 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 FOXL2NBQ6ZUU3 175 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 SLC16A14Q7RTX9 510 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 FAM122BQ7Z309 247 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 ARIH2OSQ8N7S6 290 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 FNDC8Q8TC99 324 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 C10orf105Q8TEF2 133 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 FAM46AQ96IP4 442 aaKnown RBP12.56□□□□□ -0.4
HSPG2-207ENST00000453796 RHNO1Q9BSD3 238 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 SIAEQ9HAT2 523 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 NDE1Q9NXR1 346 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 SIGLEC7Q9Y286 467 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 FAM32AQ9Y421 112 aaKnown RBP12.56□□□□□ -0.4
HSPG2-207ENST00000453796 HIVEP2P31629 2446 aa12.56□□□□□ -0.4
HSPG2-207ENST00000453796 NAV3Q8IVL0 2385 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 CD14P08571 375 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 NR2C1P13056 603 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 GLRXP35754 106 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 SLC36A2Q495M3 483 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms