RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 FSTP19883 344 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 HRH2P25021 359 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 MAP2K4P45985 399 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 NPBWR1P48145 328 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 SLC37A1P57057 533 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 RPL38P63173 70 aaKnown RBP7.02□□□□□ -1.29
BRCC3-208ENST00000453705 SRSF1Q07955 248 aaKnown RBP eCLIP7.02□□□□□ -1.29
BRCC3-208ENST00000453705 SKP2Q13309 424 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 FOXE3Q13461 319 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 GUK1Q16774 197 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 SERTAD4-AS1Q5TG53 156 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 NRARPQ7Z6K4 114 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 CDRT4Q8N9R6 151 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 BOLLQ8N9W6 283 aaKnown RBP7.02□□□□□ -1.29
BRCC3-208ENST00000453705 PLA2G15Q8NCC3 412 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 ZNF548Q8NEK5 533 aaPredicted RBP7.02□□□□□ -1.29
BRCC3-208ENST00000453705 B3GNT7Q8NFL0 401 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 FGF14Q92915 247 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 ZG16BQ96DA0 208 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 MRPL53Q96EL3 112 aaKnown RBP7.02□□□□□ -1.29
BRCC3-208ENST00000453705 RNF2Q99496 336 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 FOXQ1Q9C009 403 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 NAA50Q9GZZ1 169 aaKnown RBP7.02□□□□□ -1.29
BRCC3-208ENST00000453705 PARD6AQ9NPB6 346 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 SEMA4GQ9NTN9 838 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 VPS29Q9UBQ0 182 aa7.02□□□□□ -1.29
BRCC3-208ENST00000453705 WDR87Q6ZQQ6 2873 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 CROCCQ5TZA2 2017 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 EFCAB7A8K855 629 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 POP7O75817 140 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 IFI30P13284 250 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 GLB1P16278 677 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 IGFBP2P18065 325 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 HTR2AP28223 471 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 GDF5P43026 501 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 HNF4GQ14541 408 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 ZNF846Q147U1 533 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 DUSP7Q16829 419 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 SOHLH1Q5JUK2 328 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 NOXRED1Q6NXP6 359 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 MED27Q6P2C8 311 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 PLXDC2Q6UX71 529 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 NLGN4XQ8N0W4 816 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 PUSL1Q8N0Z8 303 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 RNF141Q8WVD5 230 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 MYLIPQ8WY64 445 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 ARSGQ96EG1 525 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 NUDT9Q9BW91 350 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 OSBPL11Q9BXB4 747 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 ANKHQ9HCJ1 492 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 SIDT1Q9NXL6 827 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 NDRG4Q9ULP0 352 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 ZFR2Q9UPR6 939 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 XIRP2A4UGR9 3374 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 TMEM129A0AVI4 362 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 DHRS12A0PJE2 317 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 A8MU76 341 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 EVPLLA8MZ36 301 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 RNASET2O00584 256 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 SDC3O75056 442 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 SERPINA1P01009 418 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 SEMG1P04279 462 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 SPP1P10451 314 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 HLA-EP13747 358 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 GPX2P18283 190 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 APEX1P27695 318 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 ARL1P40616 181 aaPredicted RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 TPTEP56180 551 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 ARF6P62330 175 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 RAE1P78406 368 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 TCTN3Q6NUS6 607 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 LRRN1Q6UXK5 716 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 HORMAD1Q86X24 394 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 PLXDC1Q8IUK5 500 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 ZNF561Q8N587 486 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 TFGQ92734 400 aaPredicted RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 CPNE4Q96A23 557 aaPredicted RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 CENPNQ96H22 339 aaPredicted RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 CDX2Q99626 313 aaPredicted RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 KCTD14Q9BQ13 255 aaPredicted RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 SLITRK2Q9H156 845 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 KAT8Q9H7Z6 458 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 USE1Q9NZ43 259 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 P2RX2Q9UBL9 471 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 MRTO4Q9UKD2 239 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 ZNF346Q9UL40 294 aaKnown RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.01□□□□□ -1.29
BRCC3-208ENST00000453705 HEBP2Q9Y5Z4 205 aa7.01□□□□□ -1.29
BRCC3-208ENST00000453705 A0A087X0K7 114 aa7□□□□□ -1.29
BRCC3-208ENST00000453705 A0A1W2PR48 441 aa7□□□□□ -1.29
BRCC3-208ENST00000453705 NKX6-3A6NJ46 265 aa7□□□□□ -1.29
BRCC3-208ENST00000453705 K7EN84 100 aa7□□□□□ -1.29
BRCC3-208ENST00000453705 TFECO14948 347 aaPredicted RBP7□□□□□ -1.29
BRCC3-208ENST00000453705 TGFB1P01137 390 aa7□□□□□ -1.29
BRCC3-208ENST00000453705 CT62P0C5K7 136 aa7□□□□□ -1.29
BRCC3-208ENST00000453705 LIMS1P48059 325 aa7□□□□□ -1.29
BRCC3-208ENST00000453705 TMBIM6P55061 237 aa7□□□□□ -1.29
BRCC3-208ENST00000453705 TBPL1P62380 186 aa7□□□□□ -1.29
BRCC3-208ENST00000453705 DUOXA1Q1HG43 343 aa7□□□□□ -1.29
BRCC3-208ENST00000453705 NDUFAF6Q330K2 333 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms