RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 KCNJ16Q9NPI9 418 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 TAS2R16Q9NYV7 291 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 FLNCQ14315 2725 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 MYO18BQ8IUG5 2567 aa10.2□□□□□ -0.78
SCN9A-204ENST00000452182 LOC100130705A0A1B0GUX0 176 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 OR6C68A6NDL8 312 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 H0YAE9 185 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 H7C1C5 153 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 DHHO43323 396 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 SLC2A10O95528 541 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 QDPRP09417 244 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 PSMB1P20618 241 aaKnown RBP10.19□□□□□ -0.78
SCN9A-204ENST00000452182 IGHV1-2P23083 117 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 GGT2P36268 569 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 VHLP40337 213 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 SLC25A1P53007 311 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 CDC42P60953 191 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 LCN6P62502 163 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 TGFBR3Q03167 851 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 TFF3Q07654 80 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 CRMP1Q14194 572 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 SNAPC1Q16533 368 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 NRN1LQ496H8 165 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 SFRP5Q5T4F7 317 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 TTC23Q5W5X9 447 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 SLC25A47Q6Q0C1 308 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 ZBTB46Q86UZ6 589 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF555Q8NEP9 628 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 TRUB1Q8WWH5 349 aaKnown RBP10.19□□□□□ -0.78
SCN9A-204ENST00000452182 PLEKHA8Q96JA3 519 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 RBM24Q9BX46 236 aaKnown RBP10.19□□□□□ -0.78
SCN9A-204ENST00000452182 HDHD5Q9BXW7 423 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 NMNAT2Q9BZQ4 307 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 TVP23BQ9NYZ1 205 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 FKBP7Q9Y680 259 aa10.19□□□□□ -0.78
SCN9A-204ENST00000452182 FAM90A27PA6NNH2 459 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF99A8MXY4 864 aaPredicted RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 ITGA5P08648 1049 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 PAICSP22234 425 aaKnown RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 CD79BP40259 229 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 ADARB1P78563 741 aaKnown RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 SNCBQ16143 134 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 CEACAM16Q2WEN9 425 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 C1QTNF12Q5T7M4 302 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 DNM1P34Q6PK57 102 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 STAC2Q6ZMT1 411 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 OR6V1Q8N148 313 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 DHRSXQ8N5I4 330 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF433Q8N7K0 673 aaPredicted RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 C1orf162Q8NEQ5 155 aaPredicted RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 OR8J1Q8NGP2 316 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 SSC4DQ8WTU2 575 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 RNASE6Q93091 150 aaKnown RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF837Q96EG3 531 aaPredicted RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 ADI1Q9BV57 179 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 NUAK2Q9H093 628 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 RACGAP1Q9H0H5 632 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 OR10A4Q9H209 315 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 GALNT8Q9NY28 637 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 GPR52Q9Y2T5 361 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 GMPPBQ9Y5P6 360 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 HCFC1P51610 2035 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 IGKV1D-43A0A0B4J1Z2 117 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 KHDRBS3O75525 346 aaKnown RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 CTLA4P16410 223 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 ZNF84P51523 738 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 AQP4P55087 323 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 FOXG1P55316 489 aaPredicted RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 FMODQ06828 376 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 IL18R1Q13478 541 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 SLC25A30Q5SVS4 291 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 OR7E24Q6IFN5 339 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 FOXL2NBQ6ZUU3 175 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 CXorf67Q86X51 503 aaPredicted RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 C17orf78Q8N4C9 275 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 CYB561A3Q8NBI2 242 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 OR2T4Q8NH00 348 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 TMEM163Q8TC26 289 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 TFAP2CQ92754 450 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 PTP4A1Q93096 173 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 KISS1RQ969F8 398 aaPredicted RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 MUS81Q96NY9 551 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 RPRD1BQ9NQG5 326 aaKnown RBP10.18□□□□□ -0.78
SCN9A-204ENST00000452182 B9D1Q9UPM9 204 aa10.18□□□□□ -0.78
SCN9A-204ENST00000452182 IGLV1-36A0A0B4J1U3 117 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 NKX2-6A6NCS4 301 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 PRR23D1E9PI22 279 aaPredicted RBP10.17□□□□□ -0.78
SCN9A-204ENST00000452182 C16orf97H3BN30 126 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 DCTN6O00399 190 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 PRODHO43272 600 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 PRKYO43930 277 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 MPZL2O60487 215 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 SLC16A7O60669 478 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 PRR23D2P0DMB1 279 aaPredicted RBP10.17□□□□□ -0.78
SCN9A-204ENST00000452182 NPR2P20594 1047 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 UGT2B10P36537 528 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 CAPGP40121 348 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 HSPA13P48723 471 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 CENPAP49450 140 aa10.17□□□□□ -0.78
SCN9A-204ENST00000452182 MRPS34P82930 218 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms