RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 A0A096LNT2 108 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 A0A1W2PPW3 197 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 GMNCA6NCL1 334 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 VSTM5A8MXK1 200 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 SNX3O60493 162 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 GMNNO75496 209 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 ADRA2AP08913 450 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 CSF3P09919 207 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 NR4A1P22736 598 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 MSX2P35548 267 aaPredicted RBP8.35□□□□□ -1.07
USP54-207ENST00000451492 RPL4P36578 427 aaKnown RBP8.35□□□□□ -1.07
USP54-207ENST00000451492 ALDH3B1P43353 468 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 DSCR9P59020 149 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 ERVS71-1P61550 626 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 ERVK-25P63136 954 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 HSF2Q03933 536 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 GLO1Q04760 184 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 EFNB3Q15768 340 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 TMEM249Q2WGJ8 235 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 SLC36A2Q495M3 483 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 IQCCQ4KMZ1 466 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 GLYATQ6IB77 296 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 HACD2Q6Y1H2 254 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 ZNF627Q7L945 461 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 RRM2BQ7LG56 351 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 OAFQ86UD1 273 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 CYP4Z1Q86W10 505 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 PRIMA1Q86XR5 153 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 PAQR4Q8N4S7 273 aaPredicted RBP8.35□□□□□ -1.07
USP54-207ENST00000451492 FAM86B1Q8N7N1 296 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 SLC30A7Q8NEW0 376 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 OR52J3Q8NH60 311 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 MRPL24Q96A35 216 aaKnown RBP8.35□□□□□ -1.07
USP54-207ENST00000451492 ZNF75AQ96N20 296 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 FOXN4Q96NZ1 517 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 RAB1BQ9H0U4 201 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 TXNIPQ9H3M7 391 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 CCNB1IP1Q9NPC3 277 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 SPAG4Q9NPE6 437 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 MYEF2Q9P2K5 600 aaKnown RBP8.35□□□□□ -1.07
USP54-207ENST00000451492 ABCD2Q9UBJ2 740 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 IL20RAQ9UHF4 553 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 DUSP13Q9UII6 198 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 RPS6KA6Q9UK32 745 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 ZNF346Q9UL40 294 aaKnown RBP8.35□□□□□ -1.07
USP54-207ENST00000451492 HIF3AQ9Y2N7 669 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 SPEF1Q9Y4P9 236 aa8.35□□□□□ -1.07
USP54-207ENST00000451492 IQCMA0A1B0GVH7 501 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 TMEM129A0AVI4 362 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 KIAA1324LA8MWY0 1029 aaPredicted RBP8.34□□□□□ -1.07
USP54-207ENST00000451492 CDC42EP2O14613 210 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 LCKP06239 509 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 ERCC1P07992 297 aaPredicted RBP8.34□□□□□ -1.07
USP54-207ENST00000451492 ZNF35P13682 527 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 DAOP14920 347 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 APEX1P27695 318 aaKnown RBP8.34□□□□□ -1.07
USP54-207ENST00000451492 PRDX6P30041 224 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 SLC9A3P48764 834 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 RPL27P61353 136 aaKnown RBP8.34□□□□□ -1.07
USP54-207ENST00000451492 PRKCDQ05655 676 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 HIST3H3Q16695 136 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 TBC1D28Q2M2D7 210 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 ARMC4Q5T2S8 1044 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 C6orf52Q5T4I8 152 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 IL17RELQ6ZVW7 336 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 IL17RDQ8NFM7 739 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 AKR7LQ8NHP1 331 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 ACOT11Q8WXI4 607 aaPredicted RBP8.34□□□□□ -1.07
USP54-207ENST00000451492 TNFRSF13CQ96RJ3 184 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 MRPL13Q9BYD1 178 aaKnown RBP8.34□□□□□ -1.07
USP54-207ENST00000451492 BPESC1Q9GZL8 116 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 KCNN2Q9H2S1 579 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 RERGLQ9H628 205 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 DENND2DQ9H6A0 471 aaPredicted RBP8.34□□□□□ -1.07
USP54-207ENST00000451492 NARFLQ9H6Q4 476 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 CHODLQ9H9P2 273 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 ARL8BQ9NVJ2 186 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 SLC7A8Q9UHI5 535 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 ADAM21Q9UKJ8 722 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 FBXL3Q9UKT7 428 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 ADAM18Q9Y3Q7 739 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 ENPP4Q9Y6X5 453 aa8.34□□□□□ -1.07
USP54-207ENST00000451492 TLN2Q9Y4G6 2542 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 IGHV4-61A0A0C4DH41 118 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 A8MV72 311 aaPredicted RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 M0R233 179 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 NDUFAB1O14561 156 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 ENTPD5O75356 428 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 PRSS23O95084 383 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 CLPTM1O96005 669 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 IGF2P01344 180 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 SERPINA5P05154 406 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 H1F0P07305 194 aaKnown RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 TSPAN19P0C672 248 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 IGHV4-31P0DP07 118 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 NAT2P11245 290 aa8.33□□□□□ -1.08
USP54-207ENST00000451492 APEHP13798 732 aaKnown RBP8.33□□□□□ -1.08
USP54-207ENST00000451492 ZNF32P17041 273 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 235.5 ms