RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	KRT72	Q14CN4	511 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	ANKDD1A	Q495B1	522 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	SAMD4B	Q5PRF9	694 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	FAM205BP	Q63HN1	556 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	C16orf89	Q6UX73	402 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	MBOAT2	Q6ZWT7	520 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	DPPA2	Q7Z7J5	298 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	SVOPL	Q8N434	492 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	FAM168A	Q92567	244 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	HDAC2	Q92769	488 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	ZNF75A	Q96N20	296 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	SORCS2	Q96PQ0	1159 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	SEPHS2	Q99611	448 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	PLK3	Q9H4B4	646 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	DYNLRB1	Q9NP97	96 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	DCAF13	Q9NV06	445 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	FBXO9	Q9UK97	447 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	TMEM5	Q9Y2B1	443 aa		13.67	□□□□□ -0.22
HDLBP-223	ENST00000449864	LY6H	O94772	140 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	F12	P00748	615 aa	Predicted RBP	13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	IGHM	P01871	453 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	NR4A1	P22736	598 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	PCSK6	P29122	969 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	RPL4	P36578	427 aa	Known RBP	13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	PPOX	P50336	477 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	RPS23	P62266	143 aa	Known RBP	13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	FMOD	Q06828	376 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	CARTPT	Q16568	116 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	NRN1L	Q496H8	165 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	C10orf128	Q5T292	105 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	TBPL2	Q6SJ96	375 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	LRRC18	Q8N456	261 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	FAM86B1	Q8N7N1	296 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	ANKS4B	Q8N8V4	417 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	FGFBP3	Q8TAT2	258 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	KCNN2	Q9H2S1	579 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	SMURF2	Q9HAU4	748 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	SLC7A8	Q9UHI5	535 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	CMAHP	Q9Y471	501 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	ZFHX3	Q15911	3703 aa		13.66	□□□□□ -0.22
HDLBP-223	ENST00000449864	HIVEP2	P31629	2446 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864		A6NIZ1	184 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	DYNC1I1	O14576	645 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	SERPINA5	P05154	406 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	ZNF35	P13682	527 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	HSD17B1	P14061	328 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	SLC25A16	P16260	332 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	RHCE	P18577	417 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	RAP1B	P61224	184 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	RAP1A	P62834	184 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	MRPS34	P82930	218 aa	Known RBP	13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	VLDLR	P98155	873 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	PLP2	Q04941	152 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	PODNL1	Q6PEZ8	512 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	DEFB107A	Q8IZN7	70 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	SLC30A7	Q8NEW0	376 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	FNDC8	Q8TC99	324 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	SLC7A13	Q8TCU3	470 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	NSMAF	Q92636	917 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	FAM46A	Q96IP4	442 aa	Known RBP	13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	TSPAN32	Q96QS1	320 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	RBP7	Q96R05	134 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	TNFRSF13C	Q96RJ3	184 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	KCNK17	Q96T54	332 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	CDRT15	Q96T59	188 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	ALG12	Q9BV10	488 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	RAB1B	Q9H0U4	201 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	C1orf198	Q9H425	327 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	GORASP2	Q9H8Y8	452 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	CDH20	Q9HBT6	801 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	CCNB1IP1	Q9NPC3	277 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	NDUFAF4	Q9P032	175 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	ABCA1	O95477	2261 aa		13.65	□□□□□ -0.22
HDLBP-223	ENST00000449864	CSPG4	Q6UVK1	2322 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	FN1	P02751	2386 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	IQCM	A0A1B0GVH7	501 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864		A0A1W2PRQ8	180 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	SH3PXD2B	A1X283	911 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	INAFM1	C9JVW0	142 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	CDC42EP2	O14613	210 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	ARPC2	O15144	300 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	GPRIN2	O60269	458 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	DIRAS1	O95057	198 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	PTH	P01270	115 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	ITGA2	P17301	1181 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	CDA	P32320	146 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	PDLIM4	P50479	330 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	MNAT1	P51948	309 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	ZNF133	P52736	654 aa	Predicted RBP	13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	HSF2	Q03933	536 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	DGCR6	Q14129	220 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	SGCA	Q16586	387 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	TBC1D28	Q2M2D7	210 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	ZBED5	Q49AG3	693 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	TMPRSS11F	Q6ZWK6	438 aa		13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	TSEN54	Q7Z6J9	526 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-223	ENST00000449864	ZNF584	Q8IVC4	421 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms