RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 SCO1O75880 301 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 LYPD3O95274 346 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 ACTL6AO96019 429 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 HOXB1P14653 301 aaPredicted RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 VAMP1P23763 118 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 AZGP1P25311 298 aaKnown RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 KIR2DL3P43628 341 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 MAP2K3P46734 347 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 CDH12P55289 794 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 DLX5P56178 289 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 LSM11P83369 360 aaKnown RBP eCLIP8.82□□□□□ -1
CCDC171-203ENST00000449575 RIN1Q13671 783 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 IQCCQ4KMZ1 466 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 WBP2NLQ6ICG8 309 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 TEX261Q6UWH6 196 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 Q6ZPB1 254 aaPredicted RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 SEM1Q6ZVN7 128 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 ATG4DQ86TL0 474 aaPredicted RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 CCDC71Q8IV32 467 aaPredicted RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 OR8H3Q8N146 312 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 DUSP18Q8NEJ0 188 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 TMEM234Q8WY98 164 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 SARAFQ96BY9 339 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 ADGRG7Q96K78 797 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 MGLLQ99685 303 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 CDCA4Q9BXL8 241 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 ZNF224Q9NZL3 707 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 TESQ9UGI8 421 aaKnown RBP8.82□□□□□ -1
CCDC171-203ENST00000449575 ALG5Q9Y673 324 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 U3KQ87 197 aa8.82□□□□□ -1
CCDC171-203ENST00000449575 A0A0B4J293 547 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 A0A0B4J2E0 115 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 A0A1B0GX12 115 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 FABP12A6NFH5 140 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 PIP5K1CO60331 668 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 SLC43A1O75387 559 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 PTHP01270 115 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 IFNA7P01567 189 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 IFNA14P01570 189 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 CSF3P09919 207 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 ADH6P28332 368 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 EIF1P41567 113 aaKnown RBP8.81□□□□□ -1
CCDC171-203ENST00000449575 RAC1P63000 192 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 EGR4Q05215 589 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 SRSF1Q07955 248 aaKnown RBP eCLIP8.81□□□□□ -1
CCDC171-203ENST00000449575 TSTQ16762 297 aaKnown RBP8.81□□□□□ -1
CCDC171-203ENST00000449575 RPTNQ6XPR3 784 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 FJX1Q86VR8 437 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 LURAP1LQ8IV03 231 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 C9orf62Q8N4C0 152 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 C19orf18Q8NEA5 215 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 C7orf34Q96L11 122 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 SRXN1Q9BYN0 137 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 RANBP3Q9H6Z4 567 aaPredicted RBP8.81□□□□□ -1
CCDC171-203ENST00000449575 SEC14L4Q9UDX3 406 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 CHRNA9Q9UGM1 479 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 A4GNTQ9UNA3 340 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 DOPEY2Q9Y3R5 2298 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 IGKV1D-42A0A075B6H8 117 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 SEMG1P04279 462 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 STSP08842 583 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 RNF224P0DH78 156 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 CPN1P15169 458 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 CBX5P45973 191 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 POLR2HP52434 150 aaKnown RBP8.81□□□□□ -1
CCDC171-203ENST00000449575 RAB14P61106 215 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 ST3GAL4Q11206 333 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 GRK1Q15835 563 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 AANATQ16613 207 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 ZSWIM7Q19AV6 140 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 IFI44LQ53G44 452 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 ZMAT1Q5H9K5 638 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 ALG10BQ5I7T1 473 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 CLLU1Q5K131 121 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 PAMR1Q6UXH9 720 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 COMMD7Q86VX2 200 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 ZNF680Q8NEM1 530 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 AKAP1Q92667 903 aaKnown RBP eCLIP8.81□□□□□ -1
CCDC171-203ENST00000449575 EPYCQ99645 322 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 RBFOX1Q9NWB1 397 aaKnown RBP8.81□□□□□ -1
CCDC171-203ENST00000449575 CNOT2Q9NZN8 540 aaKnown RBP8.81□□□□□ -1
CCDC171-203ENST00000449575 GLS2Q9UI32 602 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 SLC7A7Q9UM01 511 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 SLC9A8Q9Y2E8 581 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 CRYBG3Q68DQ2 2970 aa8.81□□□□□ -1
CCDC171-203ENST00000449575 PRRG2O14669 202 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 LRRTM2O43300 516 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 CXCL13O43927 109 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 TSC22D2O75157 780 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 TOXO94900 526 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 TGM6O95932 706 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 TSPAN19P0C672 248 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 APOBEC1P41238 236 aaKnown RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 CA7P43166 264 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 EIF1AXP47813 144 aaKnown RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 MED22Q15528 200 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 STK11Q15831 433 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 PYDC2Q56P42 97 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 SYT14P1Q58G82 188 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 TRIQKQ629K1 86 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms