RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 C2orf73Q8N5S3 287 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 NUBPLQ8TB37 319 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 DTD1Q8TEA8 209 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 ASB13Q8WXK3 278 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 S100A16Q96FQ6 103 aaKnown RBP12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 AK6Q9Y3D8 172 aaKnown RBP12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 THBS1P07996 1170 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 HOXB5P09067 269 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 CD79AP11912 226 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 HOXA5P20719 270 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 HIST1H1TP22492 207 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 PLA2G7Q13093 441 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 RSU1Q15404 277 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 TMEM244Q5VVB8 128 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 PXKQ7Z7A4 578 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 OR2L5Q8NG80 312 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 GPBAR1Q8TDU6 330 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 NECAB3Q96P71 396 aaPredicted RBP12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 TGM7Q96PF1 710 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 MFRPQ9BY79 579 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 CRLF2Q9HC73 371 aa12.27□□□□□ -0.45
SYNGAP1-204ENST00000449372 A0A0A6YYD5 115 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 A0A1W2PPH5 198 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 MAN2B1O00754 1011 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 PCCBP05166 539 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 RAB40ALP0C0E4 278 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 RAB4AP20338 218 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 TNFRSF4P43489 277 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 RAB28P51157 221 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 PRDX1Q06830 199 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 BIKQ13323 160 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 DUSP19Q8WTR2 217 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 RNF141Q8WVD5 230 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 RAB40AQ8WXH6 277 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 HSPA12BQ96MM6 686 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 OR51V1Q9H2C8 321 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 HINT3Q9NQE9 182 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 PHPT1Q9NRX4 125 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 SEMA4GQ9NTN9 838 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 PARPBPQ9NWS1 579 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 TAS2R8Q9NYW2 309 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 COMMD9Q9P000 198 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 TBC1D3EA0A087X179 549 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 TMPRSS11DO60235 418 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 ADH1BP00325 375 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 PMP2P02689 132 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 MAGEB1P43366 347 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 CDX1P47902 265 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 MAJINQ3KP22 176 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 ITPRIPL2Q3MIP1 535 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 ACOT7LQ6ZUV0 252 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 OR13C5Q8NGS8 318 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 C1orf216Q8TAB5 229 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 SLC25A38Q96DW6 304 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 GABRG3Q99928 467 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 MESP1Q9BRJ9 268 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 RSPO3Q9BXY4 272 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 RHOFQ9HBH0 211 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 ZNF443Q9Y2A4 671 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 IFNA2P01563 188 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 APODP05090 189 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 GDI1P31150 447 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 IL34Q6ZMJ4 242 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 FAM220AQ7Z4H9 259 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 GDF7Q7Z4P5 450 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 MMP21Q8N119 569 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 DUSP15Q9H1R2 295 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 HRH4Q9H3N8 390 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 C5AR2Q9P296 337 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 PLAGL1Q9UM63 463 aa12.26□□□□□ -0.45
SYNGAP1-204ENST00000449372 HGFACQ04756 655 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 CBFBQ13951 182 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 INPP5JQ15735 1006 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 SYS1Q8N2H4 156 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 C17orf47Q8NEP4 570 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 OR10D4PQ8NGN7 298 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 CMC2Q9NRP2 79 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 IFITM10A6NMD0 228 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 MARCH11A6NNE9 402 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 SOCS6O14544 535 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 PLRG1O43660 514 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 WASP42768 502 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 DLX2Q07687 328 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 FOXO1Q12778 655 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 MLF2Q15773 248 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 C11orf87Q6NUJ2 197 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 SDR9C7Q8NEX9 313 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 OR51S1Q8NGJ8 323 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 OR6X1Q8NH79 312 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 TMEM239Q8WW34 195 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 CCDC86Q9H6F5 360 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 LHX9Q9NQ69 397 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 UPB1Q9UBR1 384 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 RNF222A6NCQ9 220 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 BLOC1S5-TXNDC5H3BN57 136 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 H7C1Q1 480 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 SULT2B1O00204 365 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 ZNF749O43361 778 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 P2RX1P51575 399 aa12.25□□□□□ -0.45
SYNGAP1-204ENST00000449372 SLC48A1Q6P1K1 146 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms