RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 UBL3O95164 117 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC2A10O95528 541 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 HLA-HP01893 362 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 FCGR1AP12314 374 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 NPR2P20594 1047 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 FASP25445 335 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 LOXP28300 417 aaPredicted RBP12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 ARR3P36575 388 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 IST1P53990 364 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 FXYD6P3P58550 94 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 LCN6P62502 163 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 FMODQ06828 376 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 NPRL3Q12980 569 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 KEAP1Q14145 624 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 GSG1Q2KHT4 349 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 NRN1LQ496H8 165 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 MESTQ5EB52 335 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 C10orf128Q5T292 105 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 ADAM5Q6NVV9 412 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC22A25Q6T423 547 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 RASSF6Q6ZTQ3 369 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 ADCK1Q86TW2 530 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 C10orf67Q8IYJ2 551 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC22A24Q8N4F4 322 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 NRGNQ92686 78 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 UTP4Q969X6 686 aaKnown RBP12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 RASD2Q96D21 266 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC38A2Q96QD8 506 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 FEVQ99581 238 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 TMEM204Q9BSN7 226 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 DENND2DQ9H6A0 471 aaPredicted RBP12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 EGLN3Q9H6Z9 239 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 RNF121Q9H920 327 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 ARMC1Q9NVT9 282 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 POU2F3Q9UKI9 436 aa12.24□□□□□ -0.45
GTF3C3-206ENST00000448539 ALPK2Q86TB3 2170 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 A0A1W2PPR1 153 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC22A23A1A5C7 686 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 PRSS37A4D1T9 235 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 ARPC3O15145 178 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 IDH3BO43837 385 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 MGRN1O60291 552 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 RAB36O95755 333 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 TXNDC12O95881 172 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 PLAUP00749 431 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 RENP00797 406 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 CBR1P16152 277 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 DNASE1P24855 282 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 ZNF133P52736 654 aaPredicted RBP12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 COX10Q12887 443 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 SGCAQ16586 387 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 C3orf36Q3SXR2 165 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 CLEC12AQ5QGZ9 265 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC25A47Q6Q0C1 308 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 PAMR1Q6UXH9 720 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 C20orf204Q6ZNR8 217 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC16A14Q7RTX9 510 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 YTHDF3Q7Z739 585 aaKnown RBP12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 DPPA2Q7Z7J5 298 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 MDP1Q86V88 176 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 CLDN22Q8N7P3 220 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 FAM169BQ8N8A8 192 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 AKAP1Q92667 903 aaKnown RBP eCLIP12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 DUS3LQ96G46 650 aaKnown RBP12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 SH3GL3Q99963 347 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 BDH2Q9BUT1 245 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 SEC61A2Q9H9S3 476 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 TBC1D23Q9NUY8 699 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 KIF17Q9P2E2 1029 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 ST6GALNAC2Q9UJ37 374 aa12.23□□□□□ -0.45
GTF3C3-206ENST00000448539 IGKV1D-43A0A0B4J1Z2 117 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 IGHV1-18A0A0C4DH31 117 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 A0A1W2PPL8 197 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 HS3ST1O14792 307 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 CRYAAP02489 173 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 RAF1P04049 648 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 ANXA8P13928 327 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 CDAP32320 146 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 PTDSS1P48651 473 aaKnown RBP12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 IDH3GP51553 393 aaPredicted RBP12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 CDH11P55287 796 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 ACTR3P61158 418 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 RAB1AP62820 205 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 MRPS34P82930 218 aaKnown RBP12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 PIGFQ07326 219 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 KPNB1Q14974 876 aaKnown RBP12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 ATP6AP1Q15904 470 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC36A2Q495M3 483 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 ZNF672Q499Z4 452 aaPredicted RBP12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 TMEM53Q6P2H8 277 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 SHQ1Q6PI26 577 aaKnown RBP12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 DNM1P34Q6PK57 102 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 TMEM179BQ7Z7N9 219 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 SKA3Q8IX90 412 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 ATG16L2Q8NAA4 619 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 KBTBD8Q8NFY9 601 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 OR5K1Q8NHB7 308 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 NINJ1Q92982 152 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 FBXW5Q969U6 566 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 NMD3Q96D46 503 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms