RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 THSD4Q6ZMP0 1018 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 ZBTB49Q6ZSB9 765 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 NANOGNBQ7Z5D8 188 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 CDK20Q8IZL9 346 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 MUC15Q8N387 334 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 GALNT4Q8N4A0 578 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 OR8D4Q8NGM9 314 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 OR5J2Q8NH18 312 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 OR6S1Q8NH40 331 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 OR52N5Q8NH56 324 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 MAGEE2Q8TD90 523 aaPredicted RBP12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 TMEM158Q8WZ71 300 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 NAA11Q9BSU3 229 aaPredicted RBP12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 C9orf16Q9BUW7 83 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 ASPNQ9BXN1 380 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 DGCR6LQ9BY27 220 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 PLA2G12AQ9BZM1 189 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 KRCC1Q9NPI7 259 aaPredicted RBP12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 MRPL39Q9NYK5 338 aaKnown RBP12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 REV1Q9UBZ9 1251 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 MALT1Q9UDY8 824 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 ZNF229Q9UJW7 825 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 SIGLEC7Q9Y286 467 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 FBN3Q75N90 2809 aa12.02□□□□□ -0.49
PDLIM2-213ENST00000448520 IGHV4-30-2A0A087WSY4 118 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 AQP7P3A6NL99 342 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 MS4A18H0YCH9 400 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 BLOC1S5-TXNDC5H3BN57 136 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 PLPP3O14495 311 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 PTP4A3O75365 173 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 IGF2P01344 180 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 IGHV3-9P01782 118 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 F13BP05160 661 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 HLA-DOBP13765 273 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 ANXA8P13928 327 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 SLC25A16P16260 332 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 POLR2IP36954 125 aaKnown RBP12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 FABP6P51161 128 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 ZNF83P51522 516 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 H3F3AP84243 136 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 LOXL1Q08397 574 aaPredicted RBP12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 GABRA6Q16445 453 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 MS4A18Q3C1V0 323 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 OGFRL1Q5TC84 451 aaPredicted RBP12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 KDM4DQ6B0I6 523 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 PAQR6Q6TCH4 344 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 H1FNTQ75WM6 255 aaPredicted RBP12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 OAFQ86UD1 273 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 WDFY1Q8IWB7 410 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 C17orf78Q8N4C9 275 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 LINC00471Q8N535 108 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 LRRC75AQ8NAA5 344 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 FANK1Q8TC84 345 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 LIPHQ8WWY8 451 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 SAMD8Q96LT4 415 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 TAS2R5Q9NYW4 299 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 B3GAT1Q9P2W7 334 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 UPB1Q9UBR1 384 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 CDC42EP3Q9UKI2 254 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 ARFGEF3Q5TH69 2177 aa12.01□□□□□ -0.49
PDLIM2-213ENST00000448520 MCIDASD6RGH6 385 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 H7C417 338 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 M0R1B8 84 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 HIST1H2ABP04908 130 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 ALPLP05186 524 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 ADORA3P0DMS8 318 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 AHCYP23526 432 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 PAX7P23759 505 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 IGFBP5P24593 272 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 EPHA2P29317 976 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 NTF4P34130 210 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 TMEM249Q2WGJ8 235 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 ZIK1Q3SY52 487 aaPredicted RBP12□□□□□ -0.49
PDLIM2-213ENST00000448520 SLC36A3Q495N2 470 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 ZBED5Q49AG3 693 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 ZNF620Q6ZNG0 422 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 HIST3H2AQ7L7L0 130 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 IQCF1Q8N6M8 205 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 C1orf162Q8NEQ5 155 aaPredicted RBP12□□□□□ -0.49
PDLIM2-213ENST00000448520 HIST1H2ACQ93077 130 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 OR52D1Q9H346 318 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 ZNF556Q9HAH1 456 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 PAPOLBQ9NRJ5 636 aaKnown RBP12□□□□□ -0.49
PDLIM2-213ENST00000448520 KRT84Q9NSB2 600 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 TMEM160Q9NX00 188 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 USE1Q9NZ43 259 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 HIF3AQ9Y2N7 669 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 AMDHD2Q9Y303 409 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 CORINQ9Y5Q5 1042 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 PMF1-BGLAPU3KQ54 211 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 MXRA5Q9NR99 2828 aa12□□□□□ -0.49
PDLIM2-213ENST00000448520 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 A0A096LNT2 108 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 GPRIN2O60269 458 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 PPP1R3DO95685 299 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 SNAP29O95721 258 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 ITGA5P08648 1049 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 CSF3P09919 207 aa11.99□□□□□ -0.49
PDLIM2-213ENST00000448520 TSPAN19P0C672 248 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms