RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 FGD3Q5JSP0 725 aa11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 C10orf128Q5T292 105 aa11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 RINLQ6ZS11 566 aa11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 Q71RC1 249 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 CLDN22Q8N7P3 220 aa11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 NUP37Q8NFH4 326 aa11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 OR4K5Q8NGD3 323 aa11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 FAM46AQ96IP4 442 aaKnown RBP11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 FUZQ9BT04 418 aa11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 BARX1Q9HBU1 254 aaPredicted RBP11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 PMF1-BGLAPU3KQ54 211 aa11.03□□□□□ -0.64
PRPF40A-203ENST00000448428 IGKV1D-43A0A0B4J1Z2 117 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 ENTPD5O75356 428 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 PTP4A3O75365 173 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 FARS2O95363 451 aaKnown RBP11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 SLC2A10O95528 541 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 RAB36O95755 333 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 BMP4P12644 408 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 ITGA2P17301 1181 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 NR4A1P22736 598 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 OMPP47874 163 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 RIPPLY3P57055 190 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 ERVK-25P63136 954 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 FMODQ06828 376 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 CD47Q08722 323 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 NRN1LQ496H8 165 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 SLC25A47Q6Q0C1 308 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 CLEC9AQ6UXN8 241 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 ZNF584Q8IVC4 421 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 LRRC18Q8N456 261 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 OR52J3Q8NH60 311 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 ZNF519Q8TB69 540 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 NSMAFQ92636 917 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 DHRS1Q96LJ7 313 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 TSPAN32Q96QS1 320 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 ZNF442Q9H7R0 627 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 SMURF2Q9HAU4 748 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 TMEM5Q9Y2B1 443 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 UGT2A1Q9Y4X1 527 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 CR1P17927 2039 aa11.02□□□□□ -0.65
PRPF40A-203ENST00000448428 CHD3Q12873 2000 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 TMEM129A0AVI4 362 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 SH3PXD2BA1X283 911 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 VSTM5A8MXK1 200 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 B9A039 149 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 RNF223E7ERA6 249 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 PDE5AO76074 875 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 SERPINA5P05154 406 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 CD14P08571 375 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 NPR2P20594 1047 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 CALB2P22676 271 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 CDAP32320 146 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 RPL4P36578 427 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 LIMS1P48059 325 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 NUDT6P53370 316 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 MRPS34P82930 218 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 SNTB2Q13425 540 aaKnown RBP11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 DAG1Q14118 895 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 EFNB3Q15768 340 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 THEM4Q5T1C6 240 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 KRT80Q6KB66 452 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 TMEM53Q6P2H8 277 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 CYP2R1Q6VVX0 501 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 SLC16A14Q7RTX9 510 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 ARIH2OSQ8N7S6 290 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 MCUR1Q96AQ8 359 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 RBP7Q96R05 134 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 ALG12Q9BV10 488 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 REG4Q9BYZ8 158 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 RNF121Q9H920 327 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 SIAEQ9HAT2 523 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 IL1RAPQ9NPH3 570 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 ACTR3BQ9P1U1 418 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 FBXL3Q9UKT7 428 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 SIGLEC7Q9Y286 467 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 ADAM18Q9Y3Q7 739 aa11.01□□□□□ -0.65
PRPF40A-203ENST00000448428 RTTNQ86VV8 2226 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 YLPM1P49750 1951 aaKnown RBP11□□□□□ -0.65
PRPF40A-203ENST00000448428 A6NIZ1 184 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 FAM171A2A8MVW0 826 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 MGRN1O60291 552 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 LY6HO94772 140 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 GADD45GO95257 159 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 F12P00748 615 aaPredicted RBP11□□□□□ -0.65
PRPF40A-203ENST00000448428 EFNA4P52798 201 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 SMIM11AP58511 58 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 RAP1BP61224 184 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 SNRPD2P62316 118 aaKnown RBP11□□□□□ -0.65
PRPF40A-203ENST00000448428 RAP1AP62834 184 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 SPIBQ01892 262 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 SGCAQ16586 387 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 MSMPQ1L6U9 139 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 SLC36A2Q495M3 483 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 FAM205BPQ63HN1 556 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 FAM122BQ7Z309 247 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 DPPA2Q7Z7J5 298 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 MAPK1IP1LQ8NDC0 245 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 OR10H5Q8NGA6 315 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 FNDC8Q8TC99 324 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 NABP1Q96AH0 204 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms