RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PCDHGA9Q9Y5G4 932 aaKnown RBP13.33□□□□□ -0.28
SF1-211ENST00000448404 TRAV36DV7A0A075B6V5 113 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 IGHV5-10-1A0A0J9YXX1 117 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 EFNA2O43921 213 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 TSC22D2O75157 780 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 RENP00797 406 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 GAAP10253 952 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 PGCP20142 388 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 CFL1P23528 166 aaKnown RBP13.32□□□□□ -0.28
SF1-211ENST00000448404 CLDN6P56747 220 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 ADAM8P78325 824 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 ZNF441Q8N8Z8 693 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 PLPP7Q8NBV4 271 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 GALNT6Q8NCL4 622 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 SYNPRQ8TBG9 265 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 C12orf4Q9NQ89 552 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 EXOSC3Q9NQT5 275 aaKnown RBP13.32□□□□□ -0.28
SF1-211ENST00000448404 RABL2AQ9UBK7 228 aaPredicted RBP13.32□□□□□ -0.28
SF1-211ENST00000448404 LAMA5O15230 3695 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 TRAV1-2A0A0B4J238 106 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 OR4C45A6NMZ5 311 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 ORC5O43913 435 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 OR2J2O76002 312 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 GUSBP08236 651 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 IFNGR1P15260 489 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 CCKBRP32239 447 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 GDNFP39905 211 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 FOXF1Q12946 379 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 HLA-BQ31612 363 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 BTBD16Q32M84 506 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 SLC35D3Q5M8T2 416 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 BIVMQ86UB2 503 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 MVB12AQ96EY5 273 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 CCDC74BQ96LY2 380 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 PRO3102Q9H379 93 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 A0A1W2PNR3 127 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 PRSS37A4D1T9 235 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 KDM4BO94953 1096 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 OR6A2O95222 327 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 M6PRP20645 277 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 ANOS1P23352 680 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 GALNSP34059 522 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 P2RX1P51575 399 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 CBFBQ13951 182 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 ASPHD2Q6ICH7 369 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 CACNG6Q9BXT2 260 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 ZNF768Q9H5H4 540 aaKnown RBP13.32□□□□□ -0.28
SF1-211ENST00000448404 TCF7L1Q9HCS4 588 aa13.32□□□□□ -0.28
SF1-211ENST00000448404 MRTO4Q9UKD2 239 aaKnown RBP13.32□□□□□ -0.28
SF1-211ENST00000448404 TTC28Q96AY4 2481 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 SERPINA3P01011 423 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 DPP4P27487 766 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 GUCA2AQ02747 115 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 POU3F1Q03052 451 aaPredicted RBP13.31□□□□□ -0.28
SF1-211ENST00000448404 RIN1Q13671 783 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 ZSWIM7Q19AV6 140 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 FAM69AQ5T7M9 428 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 LYSMD4Q5XG99 296 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 PYHIN1Q6K0P9 492 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 IDO2Q6ZQW0 420 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 MAMDC2Q7Z304 686 aaPredicted RBP13.31□□□□□ -0.28
SF1-211ENST00000448404 OR11H7Q8NGC8 314 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 OR51D1Q8NGF3 324 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 ZFAND1Q8TCF1 268 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 TSEN15Q8WW01 171 aaKnown RBP13.31□□□□□ -0.28
SF1-211ENST00000448404 WDR89Q96FK6 387 aaPredicted RBP13.31□□□□□ -0.28
SF1-211ENST00000448404 WDR77Q9BQA1 342 aaPredicted RBP13.31□□□□□ -0.28
SF1-211ENST00000448404 ZMAT3Q9HA38 289 aaKnown RBP13.31□□□□□ -0.28
SF1-211ENST00000448404 KLRF1Q9NZS2 232 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 V9GY05 133 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 CDK2P24941 298 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 DCTDP32321 178 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 SLC25A1P53007 311 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 TRAM1Q15629 374 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 RSPO4Q2I0M5 234 aaPredicted RBP13.31□□□□□ -0.28
SF1-211ENST00000448404 OR10K2Q6IF99 312 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 RHBDD2Q6NTF9 364 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 UNQ9370/PRO34162Q6UXP9 181 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 KCTD12Q96CX2 325 aaKnown RBP13.31□□□□□ -0.28
SF1-211ENST00000448404 ZNF222Q9UK12 451 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 FBXL2Q9UKC9 423 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 ELF5Q9UKW6 265 aaPredicted RBP13.31□□□□□ -0.28
SF1-211ENST00000448404 SPATA2Q9UM82 520 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 HSPB11Q9Y547 144 aa13.31□□□□□ -0.28
SF1-211ENST00000448404 LEUTXA8MZ59 168 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 PLPP3O14495 311 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 RAMP1O60894 148 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 TCRBP04435 133 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 FOSL2P15408 326 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 CD53P19397 219 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 EPHA8P29322 1005 aaPredicted RBP13.3□□□□□ -0.28
SF1-211ENST00000448404 PNLIPRP2P54317 469 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 RPL27P61353 136 aaKnown RBP13.3□□□□□ -0.28
SF1-211ENST00000448404 RRAS2P62070 204 aaPredicted RBP13.3□□□□□ -0.28
SF1-211ENST00000448404 Q499Y3 187 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 ESCO2Q56NI9 601 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 CARD17Q5XLA6 110 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 TMEM71Q6P5X7 295 aa13.3□□□□□ -0.28
SF1-211ENST00000448404 ESX1Q8N693 406 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms