RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SLCO5A1Q9H2Y9 848 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 B3GAT2Q9NPZ5 323 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 PSORS1C1Q9UIG5 152 aa17.28■□□□□ 0.36
SGCE-207ENST00000447873 PHF3Q92576 2039 aaKnown RBP17.27■□□□□ 0.36
SGCE-207ENST00000447873 IGLV1-36A0A0B4J1U3 117 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 IGKV1D-43A0A0B4J1Z2 117 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 EFCAB10A6NFE3 127 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 GLI4P10075 376 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 GLO1Q04760 184 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 GUSBP1Q15486 140 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 EIF2S3LQ2VIR3 472 aaKnown RBP17.27■□□□□ 0.35
SGCE-207ENST00000447873 KLHL22Q53GT1 634 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 LINC01590Q5TEZ4 76 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 SLC25A47Q6Q0C1 308 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 GGHQ92820 318 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 ALKBH3Q96Q83 286 aaPredicted RBP17.27■□□□□ 0.35
SGCE-207ENST00000447873 RHNO1Q9BSD3 238 aa17.27■□□□□ 0.35
SGCE-207ENST00000447873 COA3Q9Y2R0 106 aaPredicted RBP17.27■□□□□ 0.35
SGCE-207ENST00000447873 FREM1Q5H8C1 2179 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 TRGV8A0A0C4DH27 118 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 TOXO94900 526 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 IGHV3-9P01782 118 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 HLA-DQA2P01906 255 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 TMIGD3P0DMS9 266 aaPredicted RBP17.26■□□□□ 0.35
SGCE-207ENST00000447873 EDNRAP25101 427 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 KIR2DL2P43627 348 aaPredicted RBP17.26■□□□□ 0.35
SGCE-207ENST00000447873 SLC15A1P46059 708 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 BLVRAP53004 296 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 KCTD21Q4G0X4 260 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 RIPPLY2Q5TAB7 128 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 TSPO2Q5TGU0 170 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 POMGNT2Q8NAT1 580 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 IPCEF1Q8WWN9 437 aaPredicted RBP17.26■□□□□ 0.35
SGCE-207ENST00000447873 COPS4Q9BT78 406 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 LINC00470Q9BZP3 86 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 HAO2Q9NYQ3 351 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 CNOT2Q9NZN8 540 aaKnown RBP17.26■□□□□ 0.35
SGCE-207ENST00000447873 UPB1Q9UBR1 384 aa17.26■□□□□ 0.35
SGCE-207ENST00000447873 ZFYVE26Q68DK2 2539 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 IRGMA1A4Y4 181 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 CRHP06850 196 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 LYNP07948 512 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 ZNF133P52736 654 aaPredicted RBP17.25■□□□□ 0.35
SGCE-207ENST00000447873 GABARAPL2P60520 117 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 RAB40BQ12829 278 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 FOXF2Q12947 444 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 C10orf128Q5T292 105 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 UBE2J2Q8N2K1 259 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 ZNF511Q8NB15 262 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 OR51G2Q8NGK0 314 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 OR6K3Q8NGY3 331 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 MYDGFQ969H8 173 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 LGALS12Q96DT0 336 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 FOXN4Q96NZ1 517 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 RBM24Q9BX46 236 aaKnown RBP17.25■□□□□ 0.35
SGCE-207ENST00000447873 DUSP21Q9H596 190 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 CRLF2Q9HC73 371 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 SLC7A10Q9NS82 523 aa17.25■□□□□ 0.35
SGCE-207ENST00000447873 MRPS18AQ9NVS2 196 aaKnown RBP17.25■□□□□ 0.35
SGCE-207ENST00000447873 PAK1IP1Q9NWT1 392 aaPredicted RBP17.25■□□□□ 0.35
SGCE-207ENST00000447873 DHHO43323 396 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 APOL3O95236 402 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 GPANK1O95872 356 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 PIPP12273 146 aaPredicted RBP17.24■□□□□ 0.35
SGCE-207ENST00000447873 OR3A2P47893 321 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 SLC35A2P78381 396 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 PMPCAQ10713 525 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 ST3GAL4Q11206 333 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 POU4F2Q12837 409 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 GGTLC2Q14390 218 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 LYPD4Q6UWN0 246 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 SHFQ7M4L6 423 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 GLB1L2Q8IW92 636 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 STX19Q8N4C7 294 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 CNN2Q99439 309 aaKnown RBP17.24■□□□□ 0.35
SGCE-207ENST00000447873 ZNF696Q9H7X3 374 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 SEC61A2Q9H9S3 476 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 CCNB1IP1Q9NPC3 277 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 FKBP14Q9NWM8 211 aa17.24■□□□□ 0.35
SGCE-207ENST00000447873 INTS1Q8N201 2190 aaKnown RBP17.24■□□□□ 0.35
SGCE-207ENST00000447873 A0A1W2PPL8 197 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 MAGEA13PA6NCF6 341 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 TVP23AA6NH52 213 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 FADS2O95864 444 aaKnown RBP17.23■□□□□ 0.35
SGCE-207ENST00000447873 MRPL3P09001 348 aaKnown RBP17.23■□□□□ 0.35
SGCE-207ENST00000447873 LAP3P28838 519 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 CEACAM8P31997 349 aaPredicted RBP17.23■□□□□ 0.35
SGCE-207ENST00000447873 GUCA1AP43080 201 aaPredicted RBP17.23■□□□□ 0.35
SGCE-207ENST00000447873 ZNF84P51523 738 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 ROR2Q01974 943 aaKnown RBP17.23■□□□□ 0.35
SGCE-207ENST00000447873 VWA1Q6PCB0 445 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 NAXEQ8NCW5 288 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 OR4F15Q8NGB8 312 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 SGCDQ92629 289 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 BBC3Q96PG8 261 aaPredicted RBP17.23■□□□□ 0.35
SGCE-207ENST00000447873 ADGRL4Q9HBW9 690 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 GPR35Q9HC97 309 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 PRSS50Q9UI38 385 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 OSGIN2Q9Y236 505 aa17.23■□□□□ 0.35
SGCE-207ENST00000447873 POLEQ07864 2286 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms