RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SHISA9B4DS77 424 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 IMPA2O14732 288 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 E2F6O75461 281 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 TIPRLO75663 272 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 SOX14O95416 240 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 GASTP01350 101 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 CECR9P0C854 216 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 NR2C1P13056 603 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 SDHAP31040 664 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 SLC6A6P31641 620 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 GSSP48637 474 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 RPS6KA3P51812 740 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 HMGA2P52926 109 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 ART1P52961 327 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 TSPAN31Q12999 210 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 MICAQ29983 383 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 GSG1Q2KHT4 349 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 ZNF672Q499Z4 452 aaPredicted RBP10.38□□□□□ -0.75
RFC4-208ENST00000447345 CLEC12AQ5QGZ9 265 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 ZNF620Q6ZNG0 422 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 TMEM179BQ7Z7N9 219 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 SKA3Q8IX90 412 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 LRRC18Q8N456 261 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 FBXW5Q969U6 566 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 SLCO4A1Q96BD0 722 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 NMD3Q96D46 503 aaKnown RBP10.38□□□□□ -0.75
RFC4-208ENST00000447345 BOD1Q96IK1 185 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 FOXN4Q96NZ1 517 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 ERMAPQ96PL5 475 aaPredicted RBP10.38□□□□□ -0.75
RFC4-208ENST00000447345 GPX7Q96SL4 187 aaPredicted RBP10.38□□□□□ -0.75
RFC4-208ENST00000447345 KCNS3Q9BQ31 491 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 ALG12Q9BV10 488 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 MMADHCQ9H3L0 296 aaPredicted RBP10.38□□□□□ -0.75
RFC4-208ENST00000447345 NRIP3Q9NQ35 241 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 TBC1D23Q9NUY8 699 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 ZNF224Q9NZL3 707 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 EDARQ9UNE0 448 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 UGT2A1Q9Y4X1 527 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 ATP23Q9Y6H3 246 aa10.38□□□□□ -0.75
RFC4-208ENST00000447345 MAP1AP78559 2803 aaPredicted RBP10.38□□□□□ -0.75
RFC4-208ENST00000447345 UBL3O95164 117 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 FARS2O95363 451 aaKnown RBP10.37□□□□□ -0.75
RFC4-208ENST00000447345 RAB36O95755 333 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 IGFBP1P08833 259 aaPredicted RBP10.37□□□□□ -0.75
RFC4-208ENST00000447345 OR8G3PP0DMU2 310 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 CBR1P16152 277 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 CD53P19397 219 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 GIPRP48546 466 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 PRRC2AP48634 2157 aaKnown RBP10.37□□□□□ -0.75
RFC4-208ENST00000447345 DBPQ10586 325 aaPredicted RBP10.37□□□□□ -0.75
RFC4-208ENST00000447345 CCNIQ14094 377 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 SGCAQ16586 387 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 RFX4Q33E94 735 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 C10orf128Q5T292 105 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 OTPQ5XKR4 325 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 GPR139Q6DWJ6 353 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 ZNF770Q6IQ21 691 aaPredicted RBP10.37□□□□□ -0.75
RFC4-208ENST00000447345 SLC25A47Q6Q0C1 308 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 DPY19L2P2Q6ZN68 376 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 C20orf204Q6ZNR8 217 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 PTCHD4Q6ZW05 846 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 ASRGL1Q7L266 308 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 ZNF627Q7L945 461 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 HS3ST5Q8IZT8 346 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 DEPDC4Q8N2C3 294 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 LINC00471Q8N535 108 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 OR52L1Q8NGH7 329 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 FGFBP3Q8TAT2 258 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 GIPC3Q8TF64 312 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 NINJ1Q92982 152 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 UTP4Q969X6 686 aaKnown RBP10.37□□□□□ -0.75
RFC4-208ENST00000447345 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 RBP7Q96R05 134 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 PLA2G12AQ9BZM1 189 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 SYT4Q9H2B2 425 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 YY1AP1Q9H869 796 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 RNF121Q9H920 327 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 SMURF2Q9HAU4 748 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 CISD1Q9NZ45 108 aaKnown RBP10.37□□□□□ -0.75
RFC4-208ENST00000447345 PDP1Q9P0J1 537 aaPredicted RBP10.37□□□□□ -0.75
RFC4-208ENST00000447345 MGAT4BQ9UQ53 548 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 LAMP3Q9UQV4 416 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 CDH10Q9Y6N8 788 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 AKAP9Q99996 3911 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 ARID1AO14497 2285 aa10.37□□□□□ -0.75
RFC4-208ENST00000447345 USF3Q68DE3 2245 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 SLC22A23A1A5C7 686 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 PRSS37A4D1T9 235 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 E7EQL1 145 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 IGKV3-15P01624 115 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 IGLV1-44P01699 117 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 CRYAAP02489 173 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 HOXB1P14653 301 aaPredicted RBP10.36□□□□□ -0.75
RFC4-208ENST00000447345 CTLA4P16410 223 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 NOS3P29474 1203 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 CALCRP30988 508 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 ARR3P36575 388 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 ZNF133P52736 654 aaPredicted RBP10.36□□□□□ -0.75
RFC4-208ENST00000447345 RAB1AP62820 205 aa10.36□□□□□ -0.75
RFC4-208ENST00000447345 NAAAQ02083 359 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms