RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 SH3PXD2BA1X283 911 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 NPIPB13A6NJU9 1138 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 B9A039 149 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 NPIPB4C9JG80 1138 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 ARPC2O15144 300 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 PDE5AO76074 875 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 ZNF26P17031 533 aaPredicted RBP12.75□□□□□ -0.37
USE1-202ENST00000445667 HOXB4P17483 251 aaPredicted RBP12.75□□□□□ -0.37
USE1-202ENST00000445667 NPR2P20594 1047 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 NR4A1P22736 598 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 SLC9A3P48764 834 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 ZNF133P52736 654 aaPredicted RBP12.75□□□□□ -0.37
USE1-202ENST00000445667 EFNA4P52798 201 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 SNRPD2P62316 118 aaKnown RBP12.75□□□□□ -0.37
USE1-202ENST00000445667 ERVK-25P63136 954 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 DGCR6Q14129 220 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 KRT72Q14CN4 511 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 TAF11Q15544 211 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 FXNQ16595 210 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 ZBED5Q49AG3 693 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 IQCCQ4KMZ1 466 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 C10orf128Q5T292 105 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 C16orf89Q6UX73 402 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 SLC16A14Q7RTX9 510 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 SVOPLQ8N434 492 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 OR10H5Q8NGA6 315 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 OR52J3Q8NH60 311 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 NMD3Q96D46 503 aaKnown RBP12.75□□□□□ -0.37
USE1-202ENST00000445667 FAM46AQ96IP4 442 aaKnown RBP12.75□□□□□ -0.37
USE1-202ENST00000445667 NSMCE2Q96MF7 247 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 SORCS2Q96PQ0 1159 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 VRK1Q99986 396 aaPredicted RBP12.75□□□□□ -0.37
USE1-202ENST00000445667 PLK3Q9H4B4 646 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 ANKRD19PQ9H560 264 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 DENND2DQ9H6A0 471 aaPredicted RBP12.75□□□□□ -0.37
USE1-202ENST00000445667 ZNF442Q9H7R0 627 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 STX18Q9P2W9 335 aaKnown RBP12.75□□□□□ -0.37
USE1-202ENST00000445667 MAGEL2Q9UJ55 1249 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 NF1P21359 2839 aa12.75□□□□□ -0.37
USE1-202ENST00000445667 SETD2Q9BYW2 2564 aaPredicted RBP12.75□□□□□ -0.37
USE1-202ENST00000445667 TRBV4-1A0A0J9YWV2 114 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 VSTM5A8MXK1 200 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 B2RBV5 119 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 GPRIN2O60269 458 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 ENTPD5O75356 428 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 F12P00748 615 aaPredicted RBP12.74□□□□□ -0.37
USE1-202ENST00000445667 IGHMP01871 453 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 SEMG1P04279 462 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 SERPINA5P05154 406 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 CCL2P13500 99 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 RPL4P36578 427 aaKnown RBP12.74□□□□□ -0.37
USE1-202ENST00000445667 SEC23BQ15437 767 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 EFNB3Q15768 340 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 SGCAQ16586 387 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 MSMPQ1L6U9 139 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 ANKDD1AQ495B1 522 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 GKAP1Q5VSY0 366 aaPredicted RBP12.74□□□□□ -0.37
USE1-202ENST00000445667 TMEM53Q6P2H8 277 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 SLC25A47Q6Q0C1 308 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 CLEC2AQ6UVW9 174 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 ZCCHC24Q8N2G6 241 aaKnown RBP12.74□□□□□ -0.37
USE1-202ENST00000445667 ZNF519Q8TB69 540 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 POM121Q96HA1 1249 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 NSL1Q96IY1 281 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 RBP7Q96R05 134 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 ALG12Q9BV10 488 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 UGT2A1Q9Y4X1 527 aa12.74□□□□□ -0.37
USE1-202ENST00000445667 H7C1C5 153 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 FAM107AO95990 144 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 OMPP47874 163 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 DSCR9P59020 149 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 LCN6P62502 163 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 MRPS34P82930 218 aaKnown RBP12.73□□□□□ -0.37
USE1-202ENST00000445667 GALK2Q01415 458 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 KRTAP1-1Q07627 177 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 SLC36A2Q495M3 483 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 THEM4Q5T1C6 240 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 CCDC197Q8NCU1 140 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 NABP1Q96AH0 204 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 DOK1Q99704 481 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 SIAEQ9HAT2 523 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 NDE1Q9NXR1 346 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 FBXL3Q9UKT7 428 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 FZR1Q9UM11 496 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 TMEM5Q9Y2B1 443 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 ADAM18Q9Y3Q7 739 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 CMAHPQ9Y471 501 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 SPEF1Q9Y4P9 236 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 ZFHX3Q15911 3703 aa12.73□□□□□ -0.37
USE1-202ENST00000445667 A6NIZ1 184 aa12.72□□□□□ -0.37
USE1-202ENST00000445667 PTP4A3O75365 173 aa12.72□□□□□ -0.37
USE1-202ENST00000445667 CD14P08571 375 aa12.72□□□□□ -0.37
USE1-202ENST00000445667 MMP7P09237 267 aaPredicted RBP12.72□□□□□ -0.37
USE1-202ENST00000445667 ITGA2P17301 1181 aa12.72□□□□□ -0.37
USE1-202ENST00000445667 MNAT1P51948 309 aa12.72□□□□□ -0.37
USE1-202ENST00000445667 RAP1BP61224 184 aa12.72□□□□□ -0.37
USE1-202ENST00000445667 RAP1AP62834 184 aa12.72□□□□□ -0.37
USE1-202ENST00000445667 SPIBQ01892 262 aa12.72□□□□□ -0.37
USE1-202ENST00000445667 NRN1LQ496H8 165 aa12.72□□□□□ -0.37
USE1-202ENST00000445667 FAM205BPQ63HN1 556 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms