RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TMEM54Q969K7 222 aa15.17■□□□□ 0.02
LIME1-202ENST00000444951 RBP7Q96R05 134 aa15.17■□□□□ 0.02
LIME1-202ENST00000444951 KCNK17Q96T54 332 aa15.17■□□□□ 0.02
LIME1-202ENST00000444951 GRIP2Q9C0E4 1043 aa15.17■□□□□ 0.02
LIME1-202ENST00000444951 PIGMQ9H3S5 423 aa15.17■□□□□ 0.02
LIME1-202ENST00000444951 MED20Q9H944 212 aa15.17■□□□□ 0.02
LIME1-202ENST00000444951 B3GAT2Q9NPZ5 323 aa15.17■□□□□ 0.02
LIME1-202ENST00000444951 GLTPQ9NZD2 209 aa15.17■□□□□ 0.02
LIME1-202ENST00000444951 KLHL21Q9UJP4 597 aa15.17■□□□□ 0.02
LIME1-202ENST00000444951 GMPPBQ9Y5P6 360 aa15.17■□□□□ 0.02
LIME1-202ENST00000444951 AKAP6Q13023 2319 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 LOC100130705A0A1B0GUX0 176 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 SLC22A23A1A5C7 686 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 FAM183AA6NL82 134 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 ZNF587BE7ETH6 402 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 SURF4O15260 269 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 CD8BP10966 210 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 ZNF3P17036 446 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 CENPAP49450 140 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 FOXG1P55316 489 aaPredicted RBP15.16■□□□□ 0.02
LIME1-202ENST00000444951 ROR2Q01974 943 aaKnown RBP15.16■□□□□ 0.02
LIME1-202ENST00000444951 ITGADQ13349 1161 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 FBXW9Q5XUX1 488 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 C12orf73Q69YU5 71 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 LINGO2Q7L985 606 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 ADCK1Q86TW2 530 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 DMRTC2Q8IXT2 367 aaPredicted RBP15.16■□□□□ 0.02
LIME1-202ENST00000444951 POMGNT2Q8NAT1 580 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 OR9Q1Q8NGQ5 310 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 RDH12Q96NR8 316 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 FOXN4Q96NZ1 517 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 TSSK2Q96PF2 358 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 IL4I1Q96RQ9 567 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 ALG12Q9BV10 488 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 RBM24Q9BX46 236 aaKnown RBP15.16■□□□□ 0.02
LIME1-202ENST00000444951 MRPL13Q9BYD1 178 aaKnown RBP15.16■□□□□ 0.02
LIME1-202ENST00000444951 SYT4Q9H2B2 425 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 CRLF2Q9HC73 371 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 SRA1Q9HD15 236 aaKnown RBP15.16■□□□□ 0.02
LIME1-202ENST00000444951 RPRD1BQ9NQG5 326 aaKnown RBP15.16■□□□□ 0.02
LIME1-202ENST00000444951 CMC2Q9NRP2 79 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 ASB6Q9NWX5 421 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 IMPAD1Q9NX62 359 aa15.16■□□□□ 0.02
LIME1-202ENST00000444951 FOXD3Q9UJU5 478 aaPredicted RBP15.16■□□□□ 0.02
LIME1-202ENST00000444951 OR6C68A6NDL8 312 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 OR6C65A6NJZ3 312 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 MSTNO14793 375 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 PRKYO43930 277 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 SLC16A7O60669 478 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 CLIC3O95833 236 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 GGT2P36268 569 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 CDC42P60953 191 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 C6orf52Q5T4I8 152 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 LRFN4Q6PJG9 635 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 ZNF474Q6S9Z5 364 aaPredicted RBP15.15■□□□□ 0.02
LIME1-202ENST00000444951 TCEANCQ8N8B7 351 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 NPEPL1Q8NDH3 523 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 MCHR2Q969V1 340 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 ZNF837Q96EG3 531 aaPredicted RBP15.15■□□□□ 0.02
LIME1-202ENST00000444951 ADI1Q9BV57 179 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 PRRG3Q9BZD7 231 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 LINC00470Q9BZP3 86 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 GPR35Q9HC97 309 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 KCNJ16Q9NPI9 418 aa15.15■□□□□ 0.02
LIME1-202ENST00000444951 IGKV1D-43A0A0B4J1Z2 117 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 FAM171A2A8MVW0 826 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 TLX2O43763 284 aaPredicted RBP15.14■□□□□ 0.01
LIME1-202ENST00000444951 LYZL6O75951 148 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 SEC14L2O76054 403 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 GYPBP06028 91 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 PCYT1AP49585 367 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 TSC22D1Q15714 1073 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 CEACAM16Q2WEN9 425 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 SLC25A35Q3KQZ1 300 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 ZNF362Q5T0B9 420 aaPredicted RBP15.14■□□□□ 0.01
LIME1-202ENST00000444951 THEM4Q5T1C6 240 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 PLBD1Q6P4A8 553 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 Q6ZT83 130 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 BEND4Q6ZU67 534 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 CXorf67Q86X51 503 aaPredicted RBP15.14■□□□□ 0.01
LIME1-202ENST00000444951 NRGNQ92686 78 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 HTRA1Q92743 480 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 UBE2FQ969M7 185 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 HRASLS5Q96KN8 279 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 LRR1Q96L50 414 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 NUAK2Q9H093 628 aa15.14■□□□□ 0.01
LIME1-202ENST00000444951 VSX1Q9NZR4 365 aaPredicted RBP15.14■□□□□ 0.01
LIME1-202ENST00000444951 NDRG4Q9ULP0 352 aaKnown RBP15.14■□□□□ 0.01
LIME1-202ENST00000444951 VPS13CQ709C8 3753 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 A0A1W2PPL8 197 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 A8MXE2 369 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 CENPBD1B2RD01 187 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 PRR23D1E9PI22 279 aaPredicted RBP15.13■□□□□ 0.01
LIME1-202ENST00000444951 DHHO43323 396 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 PRR23D2P0DMB1 279 aaPredicted RBP15.13■□□□□ 0.01
LIME1-202ENST00000444951 CLUP10909 449 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 NR2C1P13056 603 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 CTLA4P16410 223 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 PAICSP22234 425 aaKnown RBP15.13■□□□□ 0.01
LIME1-202ENST00000444951 IGHV1-2P23083 117 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms