RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 FAM46AQ96IP4 442 aaKnown RBP16.15■□□□□ 0.18
CCDC188-202ENST00000444532 RBP7Q96R05 134 aa16.15■□□□□ 0.18
CCDC188-202ENST00000444532 MUC13Q9H3R2 512 aa16.15■□□□□ 0.18
CCDC188-202ENST00000444532 NOX3Q9HBY0 568 aa16.15■□□□□ 0.18
CCDC188-202ENST00000444532 IL1RAPQ9NPH3 570 aa16.15■□□□□ 0.18
CCDC188-202ENST00000444532 TRBV4-1A0A0J9YWV2 114 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 H7C1Q1 480 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 GADD45GO95257 159 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 FABP3P05413 133 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 OMPP47874 163 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 CD47Q08722 323 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 RAB35Q15286 201 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 MST1LQ2TV78 715 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 MTX3Q5HYI7 312 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 TMEM53Q6P2H8 277 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 RINLQ6ZS11 566 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 IGFN1Q86VF2 1251 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 OR52J3Q8NH60 311 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 ZNF519Q8TB69 540 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 BCAS4Q8TDM0 211 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 FBXO17Q96EF6 278 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 COX4I2Q96KJ9 171 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 TSPAN32Q96QS1 320 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 SH3GL3Q99963 347 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 FUZQ9BT04 418 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 C1orf21Q9H246 121 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 ZNF442Q9H7R0 627 aa16.14■□□□□ 0.17
CCDC188-202ENST00000444532 GDF2Q9UK05 429 aaPredicted RBP16.14■□□□□ 0.17
CCDC188-202ENST00000444532 ZNF469Q96JG9 3925 aaPredicted RBP16.13■□□□□ 0.17
CCDC188-202ENST00000444532 SH3PXD2BA1X283 911 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 TRIM64A6NGJ6 449 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 TRIM64BA6NI03 449 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 FAM171A2A8MVW0 826 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 B9A039 149 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 NDUFS7O75251 213 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 PTP4A3O75365 173 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 SERPINA5P05154 406 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 CD14P08571 375 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 OR4A8P0C604 315 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 ZNF35P13682 527 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 NPR2P20594 1047 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 RPL4P36578 427 aaKnown RBP16.13■□□□□ 0.17
CCDC188-202ENST00000444532 LIMS1P48059 325 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 MRPS34P82930 218 aaKnown RBP16.13■□□□□ 0.17
CCDC188-202ENST00000444532 DAG1Q14118 895 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 SEC23BQ15437 767 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 EFNB3Q15768 340 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 ADIPOQQ15848 244 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 SLC36A2Q495M3 483 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 SLC25A47Q6Q0C1 308 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 SLC16A14Q7RTX9 510 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 CIARTQ8N365 385 aaPredicted RBP16.13■□□□□ 0.17
CCDC188-202ENST00000444532 ARIH2OSQ8N7S6 290 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 FGFBP3Q8TAT2 258 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 POP5Q969H6 163 aaKnown RBP16.13■□□□□ 0.17
CCDC188-202ENST00000444532 MS4A3Q96HJ5 214 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 SIAEQ9HAT2 523 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 GRHPRQ9UBQ7 328 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 FBXO9Q9UK97 447 aaPredicted RBP16.13■□□□□ 0.17
CCDC188-202ENST00000444532 PRPF19Q9UMS4 504 aaKnown RBP16.13■□□□□ 0.17
CCDC188-202ENST00000444532 AURKCQ9UQB9 309 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 SIGLEC7Q9Y286 467 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 SPEF1Q9Y4P9 236 aa16.13■□□□□ 0.17
CCDC188-202ENST00000444532 AHCYL1O43865 530 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 NDUFB2O95178 105 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 SLC2A10O95528 541 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 PATE4P0C8F1 98 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 NR4A1P22736 598 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 THBS4P35443 961 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 SNRPD2P62316 118 aaKnown RBP16.12■□□□□ 0.17
CCDC188-202ENST00000444532 ERVK-25P63136 954 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 SPIBQ01892 262 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 TNK1Q13470 666 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 TRIM25Q14258 630 aaKnown RBP16.12■□□□□ 0.17
CCDC188-202ENST00000444532 RAB39AQ14964 217 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 VHLLQ6RSH7 139 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 CYP2R1Q6VVX0 501 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 DNM1P46Q6ZS02 220 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 ZDHHC21Q8IVQ6 265 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 KCNN2Q9H2S1 579 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 RNF121Q9H920 327 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 UGT2A1Q9Y4X1 527 aa16.12■□□□□ 0.17
CCDC188-202ENST00000444532 PTHP01270 115 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 ZNF26P17031 533 aaPredicted RBP16.11■□□□□ 0.17
CCDC188-202ENST00000444532 NUDT6P53370 316 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 RIPPLY3P57055 190 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 FMODQ06828 376 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 TRPM8Q7Z2W7 1104 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 DHFR2Q86XF0 187 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 LRRC18Q8N456 261 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 NSMAFQ92636 917 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 RSRC1Q96IZ7 334 aaKnown RBP16.11■□□□□ 0.17
CCDC188-202ENST00000444532 GPX7Q96SL4 187 aaPredicted RBP16.11■□□□□ 0.17
CCDC188-202ENST00000444532 C1orf198Q9H425 327 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 PLK3Q9H4B4 646 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 GSX1Q9H4S2 264 aaPredicted RBP16.11■□□□□ 0.17
CCDC188-202ENST00000444532 TAS2R1Q9NYW7 299 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 TMCC3Q9ULS5 477 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 ADAM18Q9Y3Q7 739 aa16.11■□□□□ 0.17
CCDC188-202ENST00000444532 ARFGEF3Q5TH69 2177 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms