RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 CBX1P83916 185 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 FMODQ06828 376 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 SPOCK1Q08629 439 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 NPRL3Q12980 569 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 KRR1Q13601 381 aaKnown RBP15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 MICAQ29983 383 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 RFX4Q33E94 735 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 NRN1LQ496H8 165 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 C1orf146Q5VVC0 180 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 THSD4Q6ZMP0 1018 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 FAM122BQ7Z309 247 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 MDP1Q86V88 176 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 LILRB1Q8NHL6 650 aaPredicted RBP15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 NSMAFQ92636 917 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 NEUROG1Q92886 237 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 PIGTQ969N2 578 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 NMD3Q96D46 503 aaKnown RBP15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 MBD6Q96DN6 1003 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 HEATR1Q9H583 2144 aaKnown RBP15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 DENND2DQ9H6A0 471 aaPredicted RBP15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 VNN3Q9NY84 501 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 CISD1Q9NZ45 108 aaKnown RBP15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 IER3IP1Q9Y5U9 82 aa15.21■□□□□ 0.03
SMARCAL1-209ENST00000444508 RAI1Q7Z5J4 1906 aaPredicted RBP15.21■□□□□ 0.02
SMARCAL1-209ENST00000444508 ZNF503-AS2A6NEH8 195 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 H7C1C5 153 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 AHCYL1O43865 530 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 FKBP6O75344 327 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 IGKV3-15P01624 115 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 CRYAAP02489 173 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 NPR2P20594 1047 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 GUCA1AP43080 201 aaPredicted RBP15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 IDH3GP51553 393 aaPredicted RBP15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 ART1P52961 327 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 FXYD6P3P58550 94 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 LCN6P62502 163 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 PIGFQ07326 219 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 MESTQ5EB52 335 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 ZNF770Q6IQ21 691 aaPredicted RBP15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 RPL13AP3Q6NVV1 102 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 SLC16A14Q7RTX9 510 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 DPPA2Q7Z7J5 298 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 SKA3Q8IX90 412 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 CLDN22Q8N7P3 220 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 AQP11Q8NBQ7 271 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 OR52L1Q8NGH7 329 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 RASD2Q96D21 266 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 IFT27Q9BW83 186 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 FAIMQ9NVQ4 179 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 BEX4Q9NWD9 120 aaPredicted RBP15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 B3GNT2Q9NY97 397 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 FBXL3Q9UKT7 428 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 ATP23Q9Y6H3 246 aa15.2■□□□□ 0.02
SMARCAL1-209ENST00000444508 DSCAMO60469 2012 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 PRSS37A4D1T9 235 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 ATP6V1G2-DDX39BF2Z307 99 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 MGRN1O60291 552 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 E2F6O75461 281 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 PPP1R3DO95685 299 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 GASTP01350 101 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 IGLV1-44P01699 117 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 CECR9P0C854 216 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 APEHP13798 732 aaKnown RBP15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 PTDSS1P48651 473 aaKnown RBP15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 RAB1AP62820 205 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 MRPS34P82930 218 aaKnown RBP15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 DEFB113Q30KQ7 82 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 SLC36A2Q495M3 483 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 SLC25A47Q6Q0C1 308 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 ZNF620Q6ZNG0 422 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 ADCK1Q86TW2 530 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 OR10G2Q8NGC3 310 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 SMAP2Q8WU79 429 aaPredicted RBP15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 TMEM171Q8WVE6 324 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 SAMD8Q96LT4 415 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 ERMAPQ96PL5 475 aaPredicted RBP15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 FOXC2Q99958 501 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 SH3GL3Q99963 347 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 KCNN2Q9H2S1 579 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 RNF121Q9H920 327 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 SIAEQ9HAT2 523 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 MOKQ9UQ07 419 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 CDH10Q9Y6N8 788 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 AKAP9Q99996 3911 aa15.19■□□□□ 0.02
SMARCAL1-209ENST00000444508 PLCE1Q9P212 2302 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 MAP1AP78559 2803 aaPredicted RBP15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 IGKV1D-43A0A0B4J1Z2 117 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 SLC22A23A1A5C7 686 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 SOCS2O14508 198 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 IMPA2O14732 288 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 TXNDC12O95881 172 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 GSTM3P21266 225 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 NOS3P29474 1203 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 CDAP32320 146 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 GIPRP48546 466 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 NAAAQ02083 359 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 SGCAQ16586 387 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 TMEM53Q6P2H8 277 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 RASSF6Q6ZTQ3 369 aa15.18■□□□□ 0.02
SMARCAL1-209ENST00000444508 ASRGL1Q7L266 308 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms