RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TREML1Q86YW5 311 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 ANKS4BQ8N8V4 417 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 OR6T1Q8NGN1 323 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 VANGL1Q8TAA9 524 aaPredicted RBP6.71□□□□□ -1.34
CD44-211ENST00000442151 ZNF519Q8TB69 540 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 SYNPRQ8TBG9 265 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 MSI2Q96DH6 328 aaKnown RBP6.71□□□□□ -1.34
CD44-211ENST00000442151 TXNDC15Q96J42 360 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 MOGAT1Q96PD6 335 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 BPESC1Q9GZL8 116 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 SMURF2Q9HAU4 748 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 NPHS2Q9NP85 383 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 TUBG2Q9NRH3 451 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 INIPQ9NRY2 104 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 CYSLTR2Q9NS75 346 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 MED29Q9NX70 200 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 NKIRAS2Q9NYR9 191 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 DUSP13Q9UII6 198 aa6.71□□□□□ -1.34
CD44-211ENST00000442151 TMEM129A0AVI4 362 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 A6NIZ1 184 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 NPIPB13A6NJU9 1138 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 NPIPB4C9JG80 1138 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 BLOC1S5-TXNDC5H3BN57 136 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 H3BSA7 217 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 M0R3H8 397 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 SLC22A2O15244 555 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 OR7A10O76100 309 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 HPRP00739 348 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 HLA-DOBP13765 273 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 ACADSP16219 412 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 GCH1P30793 250 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 GIPRP48546 466 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 ARHGDIAP52565 204 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 CDH15P55291 814 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 MTPNP58546 118 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 RAP1BP61224 184 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 RAP1AP62834 184 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 RELBQ01201 579 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 NANOGP8Q6NSW7 305 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 RRM2BQ7LG56 351 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 ZER1Q7Z7L7 766 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 CARM1Q86X55 608 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 PTOV1Q86YD1 416 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 RBM15BQ8NDT2 890 aaKnown RBP6.7□□□□□ -1.34
CD44-211ENST00000442151 SLC30A7Q8NEW0 376 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 HTRA1Q92743 480 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 LRRC58Q96CX6 371 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 TIMD4Q96H15 378 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 C1orf159Q96HA4 380 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 DIRC2Q96SL1 478 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 NANOGQ9H9S0 305 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 SIAEQ9HAT2 523 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 HINT3Q9NQE9 182 aaKnown RBP6.7□□□□□ -1.34
CD44-211ENST00000442151 DECR2Q9NUI1 292 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 TMEM38BQ9NVV0 291 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 TAS2R5Q9NYW4 299 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 SEC14L4Q9UDX3 406 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 CGGBP1Q9UFW8 167 aaPredicted RBP6.7□□□□□ -1.34
CD44-211ENST00000442151 RIMS3Q9UJD0 308 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 SH3GLB1Q9Y371 365 aa6.7□□□□□ -1.34
CD44-211ENST00000442151 CR1P17927 2039 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 FN1P02751 2386 aaKnown RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 IGHV4-61A0A0C4DH41 118 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 TCF21O43680 179 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 AHCYL1O43865 530 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 SNAP29O95721 258 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 LCKP06239 509 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 CELA3BP08861 270 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 ASAH2BP0C7U1 165 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 B4GALT1P15291 398 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 KLF3P57682 345 aaPredicted RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 RAB39AQ14964 217 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 FXNQ16595 210 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 CR1LQ2VPA4 569 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 ZNF718Q3SXZ3 478 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 TTMPQ5BVD1 217 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 ZMAT1Q5H9K5 638 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 PHYHD1Q5SRE7 291 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 THEM4Q5T1C6 240 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 NHLRC1Q6VVB1 395 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 PEG10Q86TG7 708 aaKnown RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 CYP4Z1Q86W10 505 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 SKA3Q8IX90 412 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 RNF113BQ8IZP6 322 aaKnown RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 TMEM239Q8WW34 195 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 LIPHQ8WWY8 451 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 RAB39BQ96DA2 213 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 JMJD8Q96S16 334 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 ALG12Q9BV10 488 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 EGLN1Q9GZT9 426 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 IKZF5Q9H5V7 419 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 ELOVL3Q9HB03 270 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 ABCA1O95477 2261 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 CSPG4Q6UVK1 2322 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 TRAV20A0A0B4J274 112 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 MRASO14807 208 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 TPD52L2O43399 206 aaKnown RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 TPST2O60704 377 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 GMNNO75496 209 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 LY6HO94772 140 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms