RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ADRA2AP08913 450 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 ZNF35P13682 527 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 DAOP14920 347 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 ZNF16P17020 682 aaPredicted RBP17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 GLRXP35754 106 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 NR4A2P43354 598 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 LSM11P83369 360 aaKnown RBP eCLIP17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 HSF2Q03933 536 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 TBC1D28Q2M2D7 210 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 CHRFAM7AQ494W8 412 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 CYB5R2Q6BCY4 276 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 HACD2Q6Y1H2 254 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 RRM2BQ7LG56 351 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 TREML1Q86YW5 311 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 NSMAFQ92636 917 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 DOK1Q99704 481 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 NDEL1Q9GZM8 345 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 OR51B6Q9H340 312 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 TXNIPQ9H3M7 391 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 CCNB1IP1Q9NPC3 277 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 FZR1Q9UM11 496 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 HIF3AQ9Y2N7 669 aa17.13■□□□□ 0.33
SHROOM1-204ENST00000440118 EFCAB9A8MZ26 197 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 J3KTA2 159 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 SYNGR3O43761 229 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 SLC2A10O95528 541 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 PTHP01270 115 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 APEHP13798 732 aaKnown RBP17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 GZMKP49863 264 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 LAPTM4AQ15012 233 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 TAF11Q15544 211 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 NRN1LQ496H8 165 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 CPLX4Q7Z7G2 160 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 OAFQ86UD1 273 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 ZCCHC24Q8N2G6 241 aaKnown RBP17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 ICA1LQ8NDH6 482 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 OR1J2Q8NGS2 313 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 FGFBP3Q8TAT2 258 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 LIPHQ8WWY8 451 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 FOXN4Q96NZ1 517 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 KCNK17Q96T54 332 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 MRPL37Q9BZE1 423 aaKnown RBP17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 ADA2Q9NZK5 511 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 DUSP13Q9UII6 198 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 RPS6KA6Q9UK32 745 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 SNX13Q9Y5W8 968 aa17.12■□□□□ 0.33
SHROOM1-204ENST00000440118 TRAV27A0A087WT01 109 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 SLC22A23A1A5C7 686 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 FAM157BP0CG42 384 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 NCK1P16333 377 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 GUCA1AP43080 201 aaPredicted RBP17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 SEC24CP53992 1094 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 SELENOVP59797 346 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 PSME3P61289 254 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 CBX1P83916 185 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 FMODQ06828 376 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 HIST3H3Q16695 136 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 ARMC4Q5T2S8 1044 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 RGS7BPQ6MZT1 257 aaPredicted RBP17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 CBLL1Q75N03 491 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 IGFN1Q86VF2 1251 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 MEX3DQ86XN8 651 aaKnown RBP17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 ZNF584Q8IVC4 421 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 OR51A7Q8NH64 312 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 ACOT11Q8WXI4 607 aaPredicted RBP17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 ZNF75AQ96N20 296 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 MRPL13Q9BYD1 178 aaKnown RBP17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 BPESC1Q9GZL8 116 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 SPAG4Q9NPE6 437 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 REV1Q9UBZ9 1251 aa17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 FAM32AQ9Y421 112 aaKnown RBP17.11■□□□□ 0.33
SHROOM1-204ENST00000440118 NPIPB13A6NJU9 1138 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 KIAA1324LA8MWY0 1029 aaPredicted RBP17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 NPIPB4C9JG80 1138 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 LCKP06239 509 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 CCL2P13500 99 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 APLNRP35414 380 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 RPL4P36578 427 aaKnown RBP17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 EVX1P49640 407 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 CTXN1P60606 82 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 RPL27P61353 136 aaKnown RBP17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 SGCAQ16586 387 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 NKPD1Q17RQ9 610 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 C10orf128Q5T292 105 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 FAM205BPQ63HN1 556 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 OR13C2Q8NGS9 318 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 UBASH3BQ8TF42 649 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 HDAC2Q92769 488 aaKnown RBP17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 RBP7Q96R05 134 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 SEPHS2Q99611 448 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 ALG12Q9BV10 488 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 MS4A5Q9H3V2 200 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 SMURF2Q9HAU4 748 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 MAN2C1Q9NTJ4 1040 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 ADAM21Q9UKJ8 722 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 MALRD1Q5VYJ5 2156 aa17.1■□□□□ 0.33
SHROOM1-204ENST00000440118 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.1■□□□□ 0.331e-12■■■■□ 20.9
SHROOM1-204ENST00000440118 TMEM129A0AVI4 362 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 A6NIZ1 184 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 VWC2LB2RUY7 222 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms